Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0392.Seq
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 80 2e-15
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 75 4e-14
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18) 44 9e-05
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 41 9e-04
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 41 9e-04
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 33 0.30
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 31 0.93
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 31 0.93
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 30 2.1
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 29 2.8
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 29 4.9
SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21) 28 6.5
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 6.5
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 8.6
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 8.6
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 8.6
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 28 8.6
SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 218
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 219 DSGVGIYAPDAE 254
DSG G+YA D E
Sbjct: 674 DSGTGVYAADEE 685
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/83 (50%), Positives = 51/83 (61%)
Frame = +3
Query: 6 DGCSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL 185
D + +K + AA K L+ + KSL+KKYLT E+F+ LK+KKT G TL
Sbjct: 171 DMYNGVKKLLEIEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTL 230
Query: 186 LDCIQSGVENLDSGVGIYAPDAE 254
DCI SGVENLDSG GIYA D E
Sbjct: 231 SDCINSGVENLDSGTGIYAGDEE 253
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VF ELFD IIEDYH +K + H + NLD G F+ STR+R R+L+GY
Sbjct: 689 VFGELFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIRSTRIRVARNLKGYAL 748
Query: 443 NPCLTESQYKEMEDKVSGTL 502
P LT + ++E KV G L
Sbjct: 749 TPGLTRKERVDVESKVVGVL 768
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
+FA LFD IIEDYH +K KH + +LDP G F+ STR+R R+L+GY
Sbjct: 257 LFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEAPDLDPEGSFIRSTRIRVARNLKGYAL 316
Query: 443 NPCLTESQYKEMEDKV 490
P L++ E+E+KV
Sbjct: 317 TPALSKKARLEIEEKV 332
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
L G+L G +YPL+GM + T+QQL+DDHFLFK+GDRF
Sbjct: 771 LTGDLAGKYYPLSGMDEATRQQLVDDHFLFKKGDRF 806
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFLVW NEED
Sbjct: 32 WPEGRGIFHNNDKTFLVWVNEED 54
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLFKE 603
L G+L G ++PL GM++ET+QQL++DHFLFK+
Sbjct: 339 LTGDLAGKYHPLDGMTEETRQQLVNDHFLFKK 370
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFLVW NEED
Sbjct: 464 WPEGRGIFHNNDKTFLVWVNEED 486
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFLVW NEED
Sbjct: 816 WPEGRGIFHNNDKTFLVWVNEED 838
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +1
Query: 550 MSKETQQQLIDDHFLFKEGDRF 615
M + T+QQL+DDHFLFK+GDRF
Sbjct: 1 MDEATRQQLVDDHFLFKKGDRF 22
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQS 203
K+ ++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L DCI S
Sbjct: 337 KSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINS 396
Query: 204 GVENLDSGVGIYAPDAERTPC 266
GV NLDS G+YA +R C
Sbjct: 397 GVVNLDSSCGVYA--GQRLEC 415
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYP 439
S+F+ LFD I+E YH +K DKH + T NLDP G F+ STR+R R+L+GY
Sbjct: 443 SLFSPLFDKIVEHYHAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLKGYA 502
Query: 440 FNPCLTESQYKEMEDKVSGTL 502
P LT + E+E KV+ L
Sbjct: 503 LTPGLTRKERNEIEKKVTEVL 523
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
L G+L G +YPLTGM + T+Q+L+DDHFLFK+GDRF
Sbjct: 526 LTGDLAGKYYPLTGMDEATRQKLVDDHFLFKKGDRF 561
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG-- 433
+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR L G
Sbjct: 96 TVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRDLAGKY 155
Query: 434 YP 439
YP
Sbjct: 156 YP 157
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +1
Query: 502 VQLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
+++ +L G +YPLTGM + T++QL++DHFLFK+GDRF
Sbjct: 145 IRVGRDLAGKYYPLTGMDEVTREQLVNDHFLFKKGDRF 182
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFLVW NEED
Sbjct: 571 WPEGRGIFHNNDKTFLVWINEED 593
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN KTFLVW NEED
Sbjct: 192 WPEGRGIFHNNEKTFLVWVNEED 214
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 39 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFG 176
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRG 58
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYP 439
+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR+L+GY
Sbjct: 235 TVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGYG 294
Query: 440 FNPCLTESQYKEMEDKVSGT 499
P LT+ + E+E K S T
Sbjct: 295 LAPSLTKKERVELEKKASFT 314
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 105 KSLLKKYLTREVFDSLKNKKTSFG 176
K LLKKYLT +VFD LK KKT G
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRG 197
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +2
Query: 266 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFN 445
FAELFDP+IE+ H+GFKK+DKH G D ++V+S+RVR GRS+ G+
Sbjct: 118 FAELFDPVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLP 175
Query: 446 PCLTESQYKEMEDKVSGTL 502
P T ++ +E+E V+ L
Sbjct: 176 PHCTRAERREVERIVNDAL 194
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
L G+L G +YPL GMS QQQLIDDHFLF
Sbjct: 197 LGGDLNGKYYPLNGMSDAQQQQLIDDHFLF 226
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HN++K FL+W NEED
Sbjct: 240 ARDWPDARGIWHNDSKNFLIWVNEED 265
Score = 34.7 bits (76), Expect = 0.075
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 108 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAE 254
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D E
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEE 113
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VFA+LFDP+IE+ HNG+KKTDKH G+ D +V+STR R GRS+ G+
Sbjct: 458 VFADLFDPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRGFSL 515
Query: 443 NPCLTESQYKEMEDKVSGTL 502
P T ++ + +E V L
Sbjct: 516 PPHCTRAERRSVEKVVVDAL 535
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HN+NK FLVW NEED
Sbjct: 581 ARDWPDARGIWHNKNKNFLVWVNEED 606
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 505 QLEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
QL G+L GT+YPL M+ E Q+QLI+DHFLF
Sbjct: 537 QLGGDLSGTYYPLGKMTNEEQEQLINDHFLF 567
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAE 254
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D E
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEE 454
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VFA++FDP+IE HNG+KKT KH + + +G D ++V+S RVR GRS+ G
Sbjct: 424 VFADMFDPVIEKRHNGYKKTAKH-KTDLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCL 482
Query: 443 NPCLTESQYKEMEDKVSGTL 502
P + ++ +E+E V+ L
Sbjct: 483 PPWCSRAERREVEKIVTSAL 502
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VFA++FDP+IE H+G++KTD H D +G D ++V+S RVR GRS+ G
Sbjct: 55 VFADMFDPVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGL 113
Query: 443 NPCLTESQYKEMEDKVS 493
P T ++ +E+E KVS
Sbjct: 114 PPHCTRAERREVE-KVS 129
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VFA L DP+IE HNG+ K KH D + +G D FV+S RVR GRS+ G
Sbjct: 821 VFAALLDPVIEARHNGYLKGAKHVTDLNPD-NLVGGDDLDANFVLSCRVRTGRSIRGLGL 879
Query: 443 NPCLTESQYKEME 481
P T ++ +E+E
Sbjct: 880 PPHCTRAERREVE 892
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HN+NKTFLVW NEED
Sbjct: 179 ARDWPDARGIWHNDNKTFLVWVNEED 204
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HN+NKTFLVW NEED
Sbjct: 548 ARDWPDARGIWHNDNKTFLVWVNEED 573
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
L+GE KG +YPL+ M+ Q QLIDDHFLF
Sbjct: 136 LDGEFKGKYYPLSNMTAAEQDQLIDDHFLF 165
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HN+ K FLVW NEED
Sbjct: 945 ARDWPDARGIWHNDAKNFLVWVNEED 970
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
L+G LKG +YPL+ M+ Q+QLI+DHFLF
Sbjct: 902 LDGPLKGKYYPLSKMTDAEQEQLINDHFLF 931
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 505 QLEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
+L+G L G +Y L M++ Q QLIDDHFLF
Sbjct: 504 ELDGPLAGKYYSLMTMTEAEQDQLIDDHFLF 534
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 DGCSSARKAATMVDAATLEKLEAGFSKLQGSD-SKSLLKKYLTREVFDSLKNKKTSFGST 182
+ S AR+ A +A +K + ++ G + ++ + K+LTR+V++ L N KT G T
Sbjct: 731 ESVSKAREEAIKKEAER-QKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFT 789
Query: 183 LLDCIQSGVEN 215
L IQ+GV+N
Sbjct: 790 LDGVIQTGVDN 800
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN 215
+ K +T++V+ L N +T G TL IQ+GV+N
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDN 34
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +2
Query: 263 VFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
VFAEL DP+IE H G+KKTDKH D G LDP ++V+S+RVR GRS+ G+
Sbjct: 2377 VFAELLDPVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCL 2434
Query: 443 NPCLTESQYKEMEDKVS 493
P + ++ + +E K+S
Sbjct: 2435 PPHCSRAERRSVE-KIS 2450
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 636 AASWPTGRGIYHNENKTFLVWCNEED 713
A WP RGI+HNENK FLVW NEED
Sbjct: 2500 ARDWPDARGIWHNENKNFLVWVNEED 2525
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 505 QLEGELKGTFYPLTGMSKETQQQLIDDHFLF 597
+L+GE KG +YPL M+ E Q+QLI+DHFLF
Sbjct: 2456 KLDGEFKGKYYPLNKMTDEEQEQLINDHFLF 2486
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 114 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN 215
+ K LT+E++ SL++K T G TL D IQ+GV+N
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDN 2356
>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
Length = 138
Score = 44.4 bits (100), Expect = 9e-05
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRG++H ++K+FL+W NEED
Sbjct: 45 WPDGRGVWHTKDKSFLIWVNEED 67
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 266 FAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
F + + P+I+ YH GF T KH + + D A ++STR+R R+L +P
Sbjct: 14 FKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNLSMFPL 73
Query: 443 NP 448
NP
Sbjct: 74 NP 75
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFPA 621
L +L G Y T M+ E +Q+L+DDHFLF+ D+ A
Sbjct: 96 LGDDLAGNLYRHTTMTDEERQKLVDDHFLFRGKDKMQA 133
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+ N+ KTFL W NE D
Sbjct: 141 WPEGRGIFINKAKTFLNWINEGD 163
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 266 FAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPF 442
F + + P+I+ YH GF T KH + + D A ++STR+R R+L +P
Sbjct: 106 FKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNLSMFPL 165
Query: 443 NP 448
NP
Sbjct: 166 NP 167
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 508 LEGELKGTFYPLTGMSKETQQQLIDDHFLFK 600
L +L G Y T M+ E +Q+L+DDHFLF+
Sbjct: 188 LGDDLAGNLYRHTTMTDEERQKLVDDHFLFR 218
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 108 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLD----SGVGIYAPDAE 254
+++ ++LT E++ L ++KTS G TL IQ GV+N S GI A D E
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDNPTHPNISPCGIVAGDEE 129
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 353 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTL 502
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQAL 325
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 353 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTL 502
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQAL 316
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/100 (25%), Positives = 42/100 (42%)
Frame = +1
Query: 28 KPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPSLTVSNRV 207
+P+Q S P+P N + +S SR +++L K S +T R ++ T ++R
Sbjct: 154 RPRQASRPRPRGNTKTSRKTSHKTETSRKTKTSLKTKTSLKTKTSR-NTKTSRKTKTSRK 212
Query: 208 SRTWTPASVSTRRTPSVLRVRRAV*PDHRGLPQWLQEDRQ 327
++T R R R+A P P+ RQ
Sbjct: 213 TKTKPQDQDQAARPSQAARPRQAARPRQASRPRQAARPRQ 252
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 232 PTPESKFSTPDWIQSRRVDPNEVFLFFRLSNTS 134
P P+ KFS P I SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSG 206
KAA + + L KL AG++ L D+ L + LT E LK K S + +Q
Sbjct: 195 KAAVQLLKSVLPKLTAGYADLYHGDA---LVEVLTTEWHGDLKEKYPQDVSGIYQLVQGQ 251
Query: 207 VENLD 221
+E+ D
Sbjct: 252 LESRD 256
>SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21)
Length = 570
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 289 DRVKQLGEHGVRSASGA*IPTPESKFSTPDWIQSRRVD 176
+RV +L EH RS GA TP S + +W+++ RVD
Sbjct: 35 ERVPRLVEH--RSLEGA--YTPSSAWRLDEWVEAARVD 68
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 441 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 346
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -3
Query: 158 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 39
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 69 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 193 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 80
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 463 PVQGDGGQGLRHPVQLEGELKGTFYPLTGMSKE-TQQQLID 582
PV+G G G + + G ++G ++ TG KE + QQ+ID
Sbjct: 326 PVRGQGICGSCYALAAVGAVEGAYFMKTGKLKELSAQQVID 366
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 69 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 108
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 534 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 568
>SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 108
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 70 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,715,298
Number of Sequences: 59808
Number of extensions: 423875
Number of successful extensions: 1562
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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