Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0392.Seq
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 111 4e-25
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 97 8e-21
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 97 8e-21
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 62 5e-10
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 30 1.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.9
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 4.4
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 5.8
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 5.8
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 28 5.8
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 111 bits (268), Expect = 4e-25
Identities = 47/79 (59%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRVRCGRSLEG 433
++FA+LF+P+IE+YHNGFK TD P + G+ V L +LDP G+F+VSTR+RCGRSL+G
Sbjct: 77 TLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQG 136
Query: 434 YPFNPCLTESQYKEMEDKV 490
YPFNPCL+E+ YK ME ++
Sbjct: 137 YPFNPCLSETNYKMMETRM 155
Score = 84.6 bits (200), Expect = 6e-17
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 236
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 237 YAPDAE 254
YAPDAE
Sbjct: 69 YAPDAE 74
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
ELKGT+YPLTGM +ET+++LI DHFLFKEGDRF
Sbjct: 166 ELKGTYYPLTGMDEETKKKLIADHFLFKEGDRF 198
Score = 51.2 bits (117), Expect = 7e-07
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HNE KTFLVW NEED
Sbjct: 208 WPNGRGIFHNEKKTFLVWVNEED 230
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 103 bits (247), Expect = 1e-22
Identities = 55/131 (41%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEG 433
++F LFDP+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+G
Sbjct: 77 TLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQG 136
Query: 434 YPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610
YPFNPCL+E+ Y EME KV
Sbjct: 137 YPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGD 196
Query: 611 XFLQAANACRF 643
FLQAANACR+
Sbjct: 197 RFLQAANACRY 207
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 218
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 219 DSGVGIYAPDAE 254
DSGVG+YAPDAE
Sbjct: 63 DSGVGVYAPDAE 74
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
EL G ++PL GM+KE Q QLI DHFLFKEGDRF
Sbjct: 166 ELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRF 198
Score = 52.4 bits (120), Expect = 3e-07
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN KTFL+WCNEED
Sbjct: 208 WPKGRGIFHNNQKTFLIWCNEED 230
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 103 bits (247), Expect = 1e-22
Identities = 55/131 (41%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEG 433
++F LFDP+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+G
Sbjct: 114 TLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQG 173
Query: 434 YPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 610
YPFNPCL+E+ Y EME KV
Sbjct: 174 YPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGD 233
Query: 611 XFLQAANACRF 643
FLQAANACR+
Sbjct: 234 RFLQAANACRY 244
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 CSSARKAATMVDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLL 188
C A++ + V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LL
Sbjct: 31 CVQAQEGMS-VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 189 DCIQSGVENLDSGVGIYAPDAE 254
D IQSGV NLDSGVG+YAPDAE
Sbjct: 90 DVIQSGVANLDSGVGVYAPDAE 111
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 615
EL G ++PL GM+KE Q QLI DHFLFKEGDRF
Sbjct: 203 ELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRF 235
Score = 52.4 bits (120), Expect = 3e-07
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN KTFL+WCNEED
Sbjct: 245 WPKGRGIFHNNQKTFLIWCNEED 267
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 97.5 bits (232), Expect = 8e-21
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEG 433
++FA LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+G
Sbjct: 117 TLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKG 175
Query: 434 YPFNPCLTESQYKEMEDKV 490
YPFNPCLT+ Y EME KV
Sbjct: 176 YPFNPCLTQDNYLEMEGKV 194
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+A + VDAAT++K+E ++KL G + KSLLKK+LT++V + LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 198 QSGVENLDSGVGIYAPDAE 254
+SGV NLD+GVG+YAPDAE
Sbjct: 96 RSGVYNLDAGVGVYAPDAE 114
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDR 612
ELKG +YPL GM K+TQ+QLI DHFLFKEGDR
Sbjct: 205 ELKGKYYPLDGMGKDTQKQLIADHFLFKEGDR 236
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFL+W NEED
Sbjct: 247 WPKGRGIFHNNDKTFLIWVNEED 269
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 97.5 bits (232), Expect = 8e-21
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEG 433
++FA LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+G
Sbjct: 145 TLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKG 203
Query: 434 YPFNPCLTESQYKEMEDKV 490
YPFNPCLT+ Y EME KV
Sbjct: 204 YPFNPCLTQDNYLEMEGKV 222
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+A + VDAAT++K+E ++KL G + KSLLKK+LT+EV + LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 198 QSGVENLDSGVGIYAPDAE 254
+SGV NLD+GVG+YAPDAE
Sbjct: 124 RSGVYNLDAGVGVYAPDAE 142
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDR 612
ELKG +YPL GM K+TQ+QLI DHFLFKEGDR
Sbjct: 233 ELKGKYYPLDGMGKDTQKQLIADHFLFKEGDR 264
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN +KTFL+W NEED
Sbjct: 275 WPKGRGIFHNNDKTFLIWVNEED 297
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 SVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEG 433
++FA LFD IIEDYH G K PP + G+ T LDP G+++ STR+RCGRSL G
Sbjct: 90 TLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNG 148
Query: 434 YPFNPCLTESQYKEMEDKV 490
Y FNPCLTE Y EME+KV
Sbjct: 149 YQFNPCLTEDNYLEMEEKV 167
Score = 75.8 bits (178), Expect = 3e-14
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +3
Query: 42 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 212
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 213 NLDSGVGIYAPDAE 254
LD+ VG+YAPDAE
Sbjct: 74 CLDALVGVYAPDAE 87
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 517 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDR 612
ELKGT+YPL GMSK+TQ QLI DHFLFKEGDR
Sbjct: 178 ELKGTYYPLDGMSKDTQNQLIADHFLFKEGDR 209
Score = 48.4 bits (110), Expect = 5e-06
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 645 WPTGRGIYHNENKTFLVWCNEED 713
WP GRGI+HN KTFL+W NEED
Sbjct: 220 WPKGRGIFHNNKKTFLIWVNEED 242
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +3
Query: 27 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 197
+A + VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 198 QSGVENLDSGVGIYA 242
+G+ + G+ A
Sbjct: 146 LTGLRFVRQGLRFVA 160
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 136 KYSTA*RTRRPHSDPPSL---TVSNRVSRTWTPASVSTRRTPSVL 261
K S R PHS P++ TV N + +WTP+++S TP +L
Sbjct: 88 KLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSNDPTPDLL 132
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 456 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 319
VR+ + GY + + ++++TN+P SRLP + Q LGG L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 525 GHVLPPHRHVEGDPAAAHRRPLPVQGGRPLSCRPPTPAASWPTGRGIYHNE 677
G V PPH P+ RP PV G P + P P + + +YH +
Sbjct: 129 GGVPPPHYPSSNGPSQQGYRPGPVTNGPPPQGQYPPPPQAPQNYQQMYHQQ 179
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 15 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 194
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 195 I 197
+
Sbjct: 590 V 590
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 15 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 194
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 195 I 197
+
Sbjct: 590 V 590
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 15 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 194
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 195 I 197
+
Sbjct: 590 V 590
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform b protein.
Length = 1321
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 544 TGMSKETQQQLIDDHFLFKEGDRFPAGRQRLPLLGP 651
T S E +L++DHF F E R P G+ P LGP
Sbjct: 1065 TVASVERVVELLEDHFGFPERTRAPVGQ---PKLGP 1097
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform a protein.
Length = 1372
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 544 TGMSKETQQQLIDDHFLFKEGDRFPAGRQRLPLLGP 651
T S E +L++DHF F E R P G+ P LGP
Sbjct: 1116 TVASVERVVELLEDHFGFPERTRAPVGQ---PKLGP 1148
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3
Query: 12 CSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVF--DSLKNKKTSFGSTL 185
CSS +M+D+ + A L+GS S S+ + +++ S T ST+
Sbjct: 277 CSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPVDSTI 336
Query: 186 LDCIQSGVEN--LD--SGVGIYAPDA 251
LD ++ G N LD V APDA
Sbjct: 337 LDQVKIGKANSRLDFVQTVSDVAPDA 362
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 82 ASSRDPTLSRC*RSTLPGKYSTA*RTRRPHSDPPSLTVSNRVSRTWTPASVSTRRTPS 255
AS+R +LS R TLP ++ R+ D P S R TPAS +T + S
Sbjct: 257 ASNRHTSLSAGMRPTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTASRS 314
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 519 AQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLSCRPPTPAASWPTGRGIYHNE 677
AQ H LP H+ P A H+ R R P P S P+G +YHN+
Sbjct: 43 AQNHQLPWHQPRHPGPPA-HQDWGDWSANRDEQWRGP-PGPSGPSGPPVYHNQ 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,951,240
Number of Sequences: 27780
Number of extensions: 309016
Number of successful extensions: 1203
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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