Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0391.Seq
(782 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VB62 Cluster: DNA polymerase subunit alpha B; n=2; So... 64 5e-09
UniRef50_Q171D3 Cluster: Putative uncharacterized protein; n=5; ... 58 3e-07
UniRef50_UPI00015B5AA0 Cluster: PREDICTED: similar to Polymerase... 47 5e-04
UniRef50_UPI0000E490CF Cluster: PREDICTED: similar to polymerase... 47 5e-04
UniRef50_UPI0000DB70A6 Cluster: PREDICTED: similar to DNA polyme... 46 0.001
UniRef50_A7S4W9 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.12
UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140 CG... 34 3.5
UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_Q9VB62 Cluster: DNA polymerase subunit alpha B; n=2;
Sophophora|Rep: DNA polymerase subunit alpha B -
Drosophila melanogaster (Fruit fly)
Length = 653
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQDVLIKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 178
EE + +QF G+ VL +C L NI DA F+EQWMAFSL+++ G P +ENL
Sbjct: 46 EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 105
Query: 179 DLFVRKEFSKRRTNASAKETTRPA 250
F RK R+ A K T + A
Sbjct: 106 GDFERKVLQLRKDKAGYKATGQKA 129
>UniRef50_Q171D3 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 618
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 ELVTEQFKFFGINVEQDVLIKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENLD 181
E + +QF G++ +V+ KC+ +C +I DA F+E WMA+S++ + GA P ++NL
Sbjct: 5 ESLRDQFDELGVDPSPEVVNKCIEICTRYDIEDAVEFVETWMAYSVSKLGGAEPTVDNLR 64
Query: 182 LFVRKEFSKRRTNASAKETTR 244
EF+ R + T R
Sbjct: 65 DMESHEFANRGRKTAGPATNR 85
Score = 39.5 bits (88), Expect = 0.093
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 262 LTVYGAKATSPPDSEVLSSYVAVTPKRVK-IEK--DATTNQNDIV--PATYSPTVG--SA 420
L +Y +S+VL SY VTPK K + + +T +++ ++ PA+YSP S
Sbjct: 107 LVIYSNANLDSVESDVLGSYGCVTPKAQKPVSRLHGSTPDRSKVLFSPASYSPITSKRSQ 166
Query: 421 KYASRTNAGTVVHSYGDEKLLQEL 492
N+G VV+++G+ +LL+++
Sbjct: 167 DQDGPNNSGNVVYTFGNGQLLKQV 190
>UniRef50_UPI00015B5AA0 Cluster: PREDICTED: similar to Polymerase
(DNA directed), alpha 2 (70kD subunit); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Polymerase (DNA
directed), alpha 2 (70kD subunit) - Nasonia vitripennis
Length = 622
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 EELVTEQFKFFGI-NVEQDVLIKCVNLCEENNIDAETFIEQWMAFSLNYVNG-ASPNLEN 175
EEL+ E+F+ G N+ ++L KC+ LC NID E + W+AF + +++G P +
Sbjct: 5 EELL-EKFQITGCDNLSDEILEKCIELCHWYNIDEEELVNMWVAFGVGHLDGNLEPTVRA 63
Query: 176 LDLFVRKEFSKRRTNASAKETTR 244
LD K + R N + + R
Sbjct: 64 LD--EMKHVTPRNINRNPDTSNR 84
>UniRef50_UPI0000E490CF Cluster: PREDICTED: similar to polymerase
(DNA directed), alpha 2 (70kD subunit); n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
polymerase (DNA directed), alpha 2 (70kD subunit) -
Strongylocentrotus purpuratus
Length = 604
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQ---DVLIKCVNLCEENNIDAETFIEQWMAFSLNYVNGASPNLE 172
E+ ++EQF+ FG+ ++ D++ K LC + AE + +W+AFS + +G + N++
Sbjct: 6 EDDLSEQFETFGVTLDTNDPDIVDKLKELCLLYRLTAEDAVAEWIAFSTTH-SGLAINMD 64
Query: 173 NLDLFVRKEFSKRRTNASAKETTRPA 250
L+ R+ SK+ + + +PA
Sbjct: 65 TLEQLERETLSKKSSKVKTPSSRKPA 90
>UniRef50_UPI0000DB70A6 Cluster: PREDICTED: similar to DNA
polymerase 73kD CG5923-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to DNA polymerase
73kD CG5923-PA, isoform A - Apis mellifera
Length = 522
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 47 EQDVLIKCVNLCEENNIDAETFIEQWMAFSLNYVNGASPNLENLDLFVRKEFSK 208
++ ++ KCV C NID E F+E W+A+++ + +P + NL F +E K
Sbjct: 19 DKSIIDKCVQFCHVYNIDEEKFLELWVAYTITHSLDINPTINNLIQFEDEELKK 72
>UniRef50_A7S4W9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 607
Score = 39.1 bits (87), Expect = 0.12
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQ-DVLIKCVNLCEENNIDAETFIEQWMAFSLNYVNGASPNLENL 178
+E + +F+ F I ++ +L K +C ++A E+W+AFS + + P L L
Sbjct: 4 DEEIEREFEEFSITIDDVGILDKLKEICSSCRLNASQLCEEWVAFS-QALEDSDPTLATL 62
Query: 179 DLFVRKEFSKRRTNASAKETTRPAAVKV 262
+ F RK+ + + T A K+
Sbjct: 63 EKFERKQTHEMNKRVQTQFTKIEANTKM 90
>UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140
CG7421-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to Nopp140 CG7421-PB, isoform B -
Apis mellifera
Length = 685
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 292 PPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVV 456
PP +V +S VTPK++ ++ + +++ D SPT S A T+A TV+
Sbjct: 402 PPVKKVAASIAPVTPKKMSVKNEESSSSEDSSEEEESPTKKSVS-AKVTSANTVI 455
>UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1419
Score = 33.1 bits (72), Expect = 8.1
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +2
Query: 83 EENNIDAETFIEQWMAFSLNYVNGASPNLENLDLFVRKEFSKRRTNASAKETTRPAAVKV 262
EE+NID+E + + + + + V NL+ +D + KE+ + +TN + + R +
Sbjct: 194 EEDNIDSEKYSNE-SSSNDSEVENEVVNLDGIDFY--KEYEQMKTNFAEFDKDRIGTLNP 250
Query: 263 LPFMEQKPLRLQTVKYCQV 319
PF+ +L+T K Q+
Sbjct: 251 TPFLPFSGGKLKTFKKQQI 269
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,548,121
Number of Sequences: 1657284
Number of extensions: 16208028
Number of successful extensions: 43388
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43368
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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