Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0391.Seq
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.4  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 289 SPPDSEVLSSYVAVTPKRVKI 351
           S P+ E L+S + +TP +VKI
Sbjct: 66  SAPEREHLASIIRLTPTQVKI 86


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 562 TSSSSLGTCVIFKLSTSFSCSLYLILV 482
           T + + GT ++  +STS S S+YL +V
Sbjct: 289 TMTGAGGTAIV-SISTSVSTSVYLAIV 314


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 334 PKRVKIEKDATTNQNDIVPATYSP 405
           P++   E+ +  N+  IVP TY P
Sbjct: 393 PEKFDPERFSDENKAKIVPGTYMP 416


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -2

Query: 730 SIRPATYTFVCVLCLTEVLSFTPAFFIMYCDMYRM*LSNVLAFSW---RSSKPNIAFV*T 560
           S+R   Y    + C+TE  +  P   + YC   R  L   L  +W    + +   A++  
Sbjct: 506 SVRQHPYIVSLIGCVTEGRAEGPLLVVEYCS--RGDLQTYLRTAWDKFTNMQQQFAYIDE 563

Query: 559 SSSS 548
           SS+S
Sbjct: 564 SSNS 567


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 403 VNKLQELCHSDLSSRL 356
           +N L E C SD+++RL
Sbjct: 507 INVLAEACGSDITTRL 522


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 400  SPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANS 507
            SP   SA  AS   +GT   + GD K    LG  +S
Sbjct: 929  SPCRNSASPASSDRSGTPRSTNGDRKPGGSLGALSS 964


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -1

Query: 674 FLYTRLLHYVLRYVSNVIIKRTGFFVEKFKTQHRLCVNFVIVIRHL 537
           F+Y  L      +++ V I   G    +  T H  CV +V+++  L
Sbjct: 140 FVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFL 185


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -1

Query: 674 FLYTRLLHYVLRYVSNVIIKRTGFFVEKFKTQHRLCVNFVIVIRHL 537
           F+Y  L      +++ V I   G    +  T H  CV +V+++  L
Sbjct: 140 FVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFL 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,312
Number of Sequences: 336
Number of extensions: 4535
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)