BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0391.Seq
(782 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060943-1|AAL28491.1| 609|Drosophila melanogaster GM08365p pro... 64 3e-10
AE014297-4093|AAF56680.3| 653|Drosophila melanogaster CG5923-PB... 64 3e-10
AE014297-4092|AAF56681.1| 653|Drosophila melanogaster CG5923-PA... 64 3e-10
BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p pro... 30 3.1
AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro pro... 30 3.1
AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-P... 30 3.1
AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p pro... 29 7.2
AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-P... 29 7.2
X98338-2|CAA66982.1| 272|Drosophila melanogaster alcohol dehydr... 29 9.5
X78384-2|CAA55152.1| 272|Drosophila melanogaster Adh-dup protein. 29 9.5
AE014134-2512|AAO41202.1| 272|Drosophila melanogaster CG3484-PB... 29 9.5
AE014134-2511|AAF53404.1| 272|Drosophila melanogaster CG3484-PA... 29 9.5
>AY060943-1|AAL28491.1| 609|Drosophila melanogaster GM08365p
protein.
Length = 609
Score = 63.7 bits (148), Expect = 3e-10
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQDVLIKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 178
EE + +QF G+ VL +C L NI DA F+EQWMAFSL+++ G P +ENL
Sbjct: 2 EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 61
Query: 179 DLFVRKEFSKRRTNASAKETTRPA 250
F RK R+ A K T + A
Sbjct: 62 GDFERKVLQLRKDKAGYKATGQKA 85
>AE014297-4093|AAF56680.3| 653|Drosophila melanogaster CG5923-PB,
isoform B protein.
Length = 653
Score = 63.7 bits (148), Expect = 3e-10
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQDVLIKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 178
EE + +QF G+ VL +C L NI DA F+EQWMAFSL+++ G P +ENL
Sbjct: 46 EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 105
Query: 179 DLFVRKEFSKRRTNASAKETTRPA 250
F RK R+ A K T + A
Sbjct: 106 GDFERKVLQLRKDKAGYKATGQKA 129
>AE014297-4092|AAF56681.1| 653|Drosophila melanogaster CG5923-PA,
isoform A protein.
Length = 653
Score = 63.7 bits (148), Expect = 3e-10
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 EELVTEQFKFFGINVEQDVLIKCVNLCEENNI-DAETFIEQWMAFSLNYVNGASPNLENL 178
EE + +QF G+ VL +C L NI DA F+EQWMAFSL+++ G P +ENL
Sbjct: 46 EEELKQQFDEMGVEPADAVLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAIENL 105
Query: 179 DLFVRKEFSKRRTNASAKETTRPA 250
F RK R+ A K T + A
Sbjct: 106 GDFERKVLQLRKDKAGYKATGQKA 129
>BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p
protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 289 SPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNA 444
SP DS + S V+ +P + + + N N I+ YS +A A+ A
Sbjct: 432 SPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAA 483
>AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro
protein.
Length = 571
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 289 SPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNA 444
SP DS + S V+ +P + + + N N I+ YS +A A+ A
Sbjct: 431 SPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAA 482
>AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-PA
protein.
Length = 572
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 289 SPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNA 444
SP DS + S V+ +P + + + N N I+ YS +A A+ A
Sbjct: 432 SPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAA 483
>AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p
protein.
Length = 2119
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 298 DSEVLSSYVAVTPKRVK-IEKDATTNQNDIVP--ATYSPTVGSAKYASRTNAGTVVHSYG 468
DS L+S P +V ++ D Q D V A+ S VG +KY+S+ +AGT
Sbjct: 111 DSNRLASARNGNPVQVTDLDADEDDAQGDGVDGCASTSALVGGSKYSSQPSAGTANQHLE 170
Query: 469 DEKLLQEL 492
D ++L L
Sbjct: 171 DRRILNFL 178
>AE014296-1129|AAF50656.1| 2616|Drosophila melanogaster CG10129-PA
protein.
Length = 2616
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 241 TTSCRKSLTVYGAK-ATSPPDSEVLSSYVAVTPKRVK-IEKDATTNQNDIVPATYSPTVG 414
+T K +T G K T+ D+ +SS V +T + I T + + T +PT
Sbjct: 1627 STDAPKLVTTEGVKETTTTEDTTTISSIVTLTTTPLATISTTILTTEKHVAVTTLAPTTT 1686
Query: 415 SAKYASRTNAGTVVHSYGDE 474
+ + T + HS D+
Sbjct: 1687 TESAKTTTTHSSSTHSEKDQ 1706
>X98338-2|CAA66982.1| 272|Drosophila melanogaster alcohol
dehydrogenase relatedprotein protein.
Length = 272
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 53 DVLIKCVNLCEENNIDA 103
DVLI LC+ENNIDA
Sbjct: 87 DVLINGATLCDENNIDA 103
>X78384-2|CAA55152.1| 272|Drosophila melanogaster Adh-dup protein.
Length = 272
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 53 DVLIKCVNLCEENNIDA 103
DVLI LC+ENNIDA
Sbjct: 87 DVLINGATLCDENNIDA 103
>AE014134-2512|AAO41202.1| 272|Drosophila melanogaster CG3484-PB,
isoform B protein.
Length = 272
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 53 DVLIKCVNLCEENNIDA 103
DVLI LC+ENNIDA
Sbjct: 87 DVLINGATLCDENNIDA 103
>AE014134-2511|AAF53404.1| 272|Drosophila melanogaster CG3484-PA,
isoform A protein.
Length = 272
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 53 DVLIKCVNLCEENNIDA 103
DVLI LC+ENNIDA
Sbjct: 87 DVLINGATLCDENNIDA 103
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,051,211
Number of Sequences: 53049
Number of extensions: 785278
Number of successful extensions: 1941
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -