Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0391.Seq
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g ...    30   2.1  
U13070-4|AAC46640.2|  531|Caenorhabditis elegans Aldehyde dehydr...    29   3.7  
AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm rec...    29   3.7  
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AC006729-5|AAK84599.2|  568|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z67883-1|CAA91805.1|  415|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    28   6.6  
U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U21550-1|AAC47236.1|  378|Caenorhabditis elegans ECA39 protein.        28   6.6  

>U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g
           protein signalingprotein 6 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 361 ATTNQNDIVPATYSPTVGSAKYASRTNAGT 450
           A T+Q+ +    YSP  G   +ASR  AGT
Sbjct: 503 AGTSQDRMASGVYSPATGGPSFASRAAAGT 532


>U13070-4|AAC46640.2|  531|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 9 protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 349 IEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKA 501
           + +DA  N   +VPAT    VG+A     T    +VH    +++L+ L KA
Sbjct: 295 VNEDADLNM--VVPATVFAAVGTAGQRCTTTRRLIVHDKVYDQVLERLKKA 343


>AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 162 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 707 VCLCFVSN*GTFLYTRLLHYVL 642
           VC CF+   GT  Y R++H +L
Sbjct: 211 VCFCFIIYFGTLTYKRIMHLIL 232


>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
           protein ZK270.2e protein.
          Length = 4541

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 844 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 895


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
           protein ZK270.2d protein.
          Length = 4648

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 833 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 884


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
           protein ZK270.2a protein.
          Length = 4530

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 833 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 884


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
           protein ZK270.2e protein.
          Length = 4541

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 844 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 895


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
           protein ZK270.2d protein.
          Length = 4648

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 833 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 884


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
           protein ZK270.2a protein.
          Length = 4530

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 301 SEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHS 462
           S+ LS Y   T +    E DAT   +D+ P+T+S +  S +Y+S+ +  T++ S
Sbjct: 833 SQTLSGYPESTSQFTG-ELDATHRDDDLEPSTFSHSNKSQQYSSKQDK-TIITS 884


>AC006729-5|AAK84599.2|  568|Caenorhabditis elegans Hypothetical
           protein Y24D9A.2 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 334 PK-RVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKAN 504
           PK R++I+ + T N+ND++P  YS   G     S     T+ + Y D  ++ +  + N
Sbjct: 201 PKNRIRIKSNLTFNENDVIP-VYSDLEGET-LESLEIPVTLTYDYTDVNMVDQFTEPN 256


>Z67883-1|CAA91805.1|  415|Caenorhabditis elegans Hypothetical
           protein K02A4.1 protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 397 YSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKAN 504
           Y+PT+   K A+  N   V+  YG+ + L E+G  N
Sbjct: 249 YAPTIWVGKEAASKNCQQVLWLYGENEDLTEVGTMN 284


>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
            F22E10.1 protein.
          Length = 1318

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 129  AIHCSIKVSASILFSSHKFTHFIKTSCSTFM 37
            AI+C +  S +++ SSH F  F+K   +  M
Sbjct: 1021 AINCMMMGSVAVMHSSHNFPEFVKAKTAAGM 1051


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +1

Query: 244  TSCRKSLTVYGAKATSPPDSEVLSSYVAVTPK----RVKIEKDATTNQNDIVPATYSPTV 411
            T   K+ +   A A +  DSEV   Y   TPK    R    K + +++   +P+T    V
Sbjct: 1200 TELEKAASANFATAETSEDSEV-KPYQPQTPKKPESRKSSAKSSASSKRSKIPSTSQSRV 1258

Query: 412  GSAK 423
            GSAK
Sbjct: 1259 GSAK 1262


>U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical
           protein F09F9.4 protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
 Frame = -2

Query: 556 SSSLGTCVIFKLSTSFSCSLYLILVVISHLHKNG---------PPCLRLF--STRTSLNR 410
           +S++ +C +FK +    C  +L +     L +NG         PP +++F  ST   LN 
Sbjct: 56  ASNISSC-LFKTAV-IPCECFLQVSNDYRLEENGKLLSKFAVSPPDIKIFTPSTHEMLNE 113

Query: 409 RSVNKLQELCHSDLS 365
            +V+ L +LC  DLS
Sbjct: 114 LTVHILPKLCREDLS 128


>U21550-1|AAC47236.1|  378|Caenorhabditis elegans ECA39 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 397 YSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKAN 504
           Y+PT+   K A+  N   V+  YG+ + L E+G  N
Sbjct: 230 YAPTIWVGKEAASKNCQQVLWLYGENEDLTEVGTMN 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,867,411
Number of Sequences: 27780
Number of extensions: 419792
Number of successful extensions: 1212
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)