Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0385.Seq
         (790 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   3e-04
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    41   0.041
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    41   0.041
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   1.2  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    36   1.2  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.5  

>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -2

Query: 150 LLPSLDVVAVSQAPSPESNPDSP 82
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 40.7 bits (91), Expect = 0.041
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = -3

Query: 254 KIFKVYSFRLRGLVRVPYRYFSSLPPVPGVG 162
           K FKV SF+L+GL RV Y YFSSLPP  G G
Sbjct: 73  KGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103



 Score = 39.5 bits (88), Expect = 0.094
 Identities = 23/47 (48%), Positives = 25/47 (53%)
 Frame = -1

Query: 382 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKYLK 242
           G P AR  + TTSFLTA  L+Y           TRLALQ  LVK  K
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFK 76


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 40.7 bits (91), Expect = 0.041
 Identities = 27/61 (44%), Positives = 30/61 (49%)
 Frame = -1

Query: 340 LTATILVYXXXXXXXXXXXTRLALQLFLVKYLKCTHSDYEAS*ESRIVIFRHYLPCREWV 161
           LTATIL+Y           TRLALQL   K L   HS+Y+      IVI  HYL   E  
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYLSYLELA 373

Query: 160 I 158
           I
Sbjct: 374 I 374



 Score = 39.1 bits (87), Expect = 0.12
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -2

Query: 129 VAVSQAPSPESNPDSPLPVTTMVVAETTIES 37
           +A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402



 Score = 36.7 bits (81), Expect = 0.66
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = -3

Query: 725 LWQMFR*CSSCDDPRISPLTSQYECPQ 645
           L + FR C S ++ RISPLTS+Y+CPQ
Sbjct: 258 LGKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
          tropicalis|Rep: Novel protein - Xenopus tropicalis
          (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 22 MSALSTFDGSFCDYHG 69
          MSALSTFDG+FC YHG
Sbjct: 1  MSALSTFDGTFCAYHG 16


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -3

Query: 467 RILILNRRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 306
           R++   ++F            V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 142 RVMSFQKKFKSPEFAAQYDRPVNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 308 SWNYRGCWHQTCP 270
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,598,416
Number of Sequences: 1657284
Number of extensions: 15838916
Number of successful extensions: 40124
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40098
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)