Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0385.Seq
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 30 2.5
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 29 3.2
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 3.2
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1) 29 4.3
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 5.7
SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045) 28 7.5
SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32) 28 9.9
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 9.9
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35) 28 9.9
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD RKTN E+ AK VFINQERKLE R
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKLEDR 31
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2
Query: 135 DVVAVSQAPSPESNPDSPLPVTTM 64
DVVAVSQAPSPESNP+SP PV TM
Sbjct: 105 DVVAVSQAPSPESNPNSPSPVVTM 128
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD RKTN E+ + VFINQERKLE R
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKLEDR 31
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD RKTN E+ + FINQERKLE R
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDR 31
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 712 NICQRCFHQSRTKVRGSRRLDTALVL 789
+ICQ CF K+ RR DT LVL
Sbjct: 15 SICQECFINQERKLEDRRRSDTVLVL 40
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD RKTN E+ + FINQERKLE R
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKLEDR 31
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 712 NICQRCFHQSRTKVRGSRRLDTALVL 789
+ICQ CF K+ RR DT LVL
Sbjct: 15 SICQECFINQERKLEDRRRSDTVLVL 40
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 126 AVSQAPSPESNPDSPLPVTTM 64
AVSQAPSPESNP+SP PV TM
Sbjct: 52 AVSQAPSPESNPNSPSPVVTM 72
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD + ++ FAK VFINQERKLE R
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDR 31
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD + ++ FAK VFINQERKLE R
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDR 31
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 674 VKFLDRRKTNISETFAKGVFINQERKLEVR 763
VKFLD + ++ FAK VFINQERKLE R
Sbjct: 2 VKFLDYERRTTAKAFAKNVFINQERKLEDR 31
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 673 GEILGSSQDEHQRNICQRCFHQSRTKVRGSRRLDTALVL 789
GEILG + + +ICQ CF K+ RR DT LVL
Sbjct: 2 GEILGFRKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +3
Query: 258 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 383
R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 61 RIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 102
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +3
Query: 258 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 383
R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 14 RIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 55
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 125 PFLRLPLRNRTLIPRYP 75
PFLRLPLRNRTLI R+P
Sbjct: 224 PFLRLPLRNRTLILRHP 240
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 671 EVKFLDRRKTNISETFAKGVFINQERKLEVR 763
E+ ++ R+T ++ FAK VFINQERKLE R
Sbjct: 2 EISWIYERRTT-AKAFAKNVFINQERKLEDR 31
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 686 DRRKTNISETFAKGVFINQERKLEVR 763
+RR ++ FAK VFINQERKLE R
Sbjct: 25 ERRARTTAKAFAKNVFINQERKLEDR 50
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 686 DRRKTNISETFAKGVFINQERKLEVR 763
+RR T ++ FAK VFINQERKLE R
Sbjct: 10 ERRTT--AKAFAKNVFINQERKLEDR 33
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 707 SETFAKGVFINQERKLEVR 763
++ FAK VFINQERKLE R
Sbjct: 5 AKAFAKNVFINQERKLEDR 23
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 270 RASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 383
RASL Y K+VAVKKLVV F VG P
Sbjct: 5 RASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 42
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 258 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 383
R ASL Y K+VAVKKLVV F VG P
Sbjct: 24 RERRAASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 65
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 157 KLPTPGTGGSDEK*RYGTLTRPRNRNEYTLNILRGTIGGQVW 282
+LP +GGS K + + +N N T+NI RG G W
Sbjct: 422 RLPATKSGGSHIKFLQEAILQKKNNNNLTININRGGGGTNRW 463
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 578 LFHARNIQAAFLARFEHSNLFKVNCRPTSTLTEEHRDRILI 456
L RNI A L+R + LF NC T T T+E D +L+
Sbjct: 1478 LLRKRNIDADSLSRLKDIRLFMENC--TETATKEAIDSMLV 1516
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 318 YTKIVAVKKLVVAFVRRAVGAP 383
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 318 YTKIVAVKKLVVAFVRRAVGAP 383
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 318 YTKIVAVKKLVVAFVRRAVGAP 383
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1)
Length = 812
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 142 RQQARKLPTPGTGGSDEK*RYGTLTRPRNRNEYTLNILRGTIGGQ 276
RQ R+ P+ TGG+ + R T++ R + +Y RG+I Q
Sbjct: 188 RQDKRQYPSAKTGGNIHQQRQETVSISRGKRQYPSTETRGSIHQQ 232
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 356 CNYELFNRNNFSIRYWSWNYRGCWH 282
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045)
Length = 1050
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 479 EHRDRILILNRRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWN 300
E RD L NR+ ++ + +V P + S + + + FSI YW W+
Sbjct: 453 ELRDTYLTENRQLNMYDYRENDGIDCAVWPHLYPYHSWSRRSAATSLDTKTFSIEYWRWH 512
Query: 299 YR 294
+R
Sbjct: 513 HR 514
>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
Length = 943
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 136 QGRQQARK--LPTPGTGGSDEK*RYGTLTRPRNRNEYTLNILRGTIG 270
QGR + RK L PG GGSD K R + RN + G G
Sbjct: 136 QGRDEVRKAILDIPGEGGSDMKSRLQREVQEARRNAVKTDEEEGASG 182
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 144 PSLDVVAVSQAPSPESNPDSPLP 76
P+ DV+A Q P P S D PLP
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLP 97
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 395 SPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 297
S R+RCT S + KC + + F W S+NY
Sbjct: 147 SYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
>SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35)
Length = 1577
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +1
Query: 655 SYCD----VRGEILGSSQDEHQRNICQRCFHQSRTKVRGSRRLD 774
SYCD VR LG + N C+RCFH +TK G+ D
Sbjct: 583 SYCDRCMNVRTRSLGVGECCLTDNFCERCFH-LQTKTIGTGDYD 625
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,172,393
Number of Sequences: 59808
Number of extensions: 510204
Number of successful extensions: 1377
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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