Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0385.Seq
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 2.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 4.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 4.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.3
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 5.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 5.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 7.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.5
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 21 9.9
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 491 TLTEEHRDRILILNRRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELF 339
T+ E +R+ ++++ T DM+ +S P+ ++A N E+F
Sbjct: 444 TIENEQLNRMYKSYPNYIDKE-TKDMNLEISTRPKSNTVENACVLKNTEIF 493
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.2
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -3
Query: 485 TEEHRDRILILNRRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 306
T + R R R E ++ +S N S ++ + NY NN+ Y++
Sbjct: 295 TSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYN 354
Query: 305 WNY 297
NY
Sbjct: 355 INY 357
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 449 RRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 297
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 449 RRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 297
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 449 RRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 297
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 449 RRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 297
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 449 RRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 297
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 666 VAIRMPPVIPINH-----YLGVLKTN 604
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 666 VAIRMPPVIPINH-----YLGVLKTN 604
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 666 VAIRMPPVIPINH-----YLGVLKTN 604
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 697 DEHQRNICQRCFHQ 738
D+ QRN CQ C +Q
Sbjct: 155 DKRQRNRCQYCRYQ 168
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 697 DEHQRNICQRCFHQ 738
D+ QRN CQ C +Q
Sbjct: 155 DKRQRNRCQYCRYQ 168
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 7.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 482 EEHRDRILILNRRFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSW 303
E RDR R E ++ +S N ++ ++ + NY N NN+ Y++
Sbjct: 65 ERSRDRTE--RERSREPKIISSLS-NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121
Query: 302 NY 297
NY
Sbjct: 122 NY 123
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 142 RQQARKLPTPGTGGSDE 192
R+Q RK TPG SDE
Sbjct: 1768 RRQQRKQQTPGDVESDE 1784
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 142 RQQARKLPTPGTGGSDE 192
R+Q RK TPG SDE
Sbjct: 1764 RRQQRKQQTPGDVESDE 1780
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 658 YCDVRGEILGSSQDEHQRNICQRC 729
+CDV G+ + E N C RC
Sbjct: 45 HCDVIGKKIKELLPEVLNNHCNRC 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,606
Number of Sequences: 438
Number of extensions: 5139
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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