Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0379.Seq
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    47   3e-04
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.21 
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    37   0.48 
UniRef50_A7AZT7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.64 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   4.5  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 28/62 (45%), Positives = 32/62 (51%)
 Frame = +1

Query: 448 SFLTATILVYXXXXXXXXXXXPDLPSNCSSLKYLKWYSFRLRGLVRVPYRYLSSLPPRAG 627
           SFLTA  L+Y             L      +K  K  SF+L+GL RV Y Y SSLPPR G
Sbjct: 42  SFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVG 101

Query: 628 SG 633
           SG
Sbjct: 102 SG 103


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +3

Query: 576 PRKSPVSLSFVTTSPCREW 632
           PRKSPV L FVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7AZT7 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus gnavus ATCC 29149|Rep: Putative
           uncharacterized protein - Ruminococcus gnavus ATCC 29149
          Length = 522

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +2

Query: 125 NVAI*IXPFIPINHYLGVLQTNKIEPRSYSIIPCTKYSSSIFSRFEHSNLFKVKLSAHLD 304
           N +I + P+IP+    GVL    +   + + I     +  ++S   + + F V++  H D
Sbjct: 392 NRSILLGPWIPLYGICGVLSVTMLHRFAKNPILAFCMNGLLYSVIGYLSDFTVQMIWHAD 451

Query: 305 THRRASRHXPDIEPAFFRTPAHRRYAPQTCQY 400
            H+ +    P + P FF           TCQY
Sbjct: 452 LHKISQYFRPSLLPPFFADAVFLGLIGCTCQY 483


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,257,618
Number of Sequences: 1657284
Number of extensions: 11370260
Number of successful extensions: 26206
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26192
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)