Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0379.Seq
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022126-1|AAY51521.1|  712|Drosophila melanogaster IP08939p pro...    29   7.2  
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P...    29   7.2  
AB235207-1|BAF31332.1| 1089|Drosophila melanogaster CG32611 prot...    29   7.2  

>BT022126-1|AAY51521.1|  712|Drosophila melanogaster IP08939p
           protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 221 PCTKYSSSIFSRFEHSNLFKVKLSAHLDTHRRASRHXPDIEPAFFRTPAHRRY 379
           P T  +  I  R  H NL ++  + H   H+ +  H P  +     TP H+++
Sbjct: 402 PATAMARGIAQRLAHQNLQRLHHTHHHAQHQHSQHHHPHSQ--HHHTPHHQQH 452


>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
           protein.
          Length = 1103

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 221 PCTKYSSSIFSRFEHSNLFKVKLSAHLDTHRRASRHXPDIEPAFFRTPAHRRY 379
           P T  +  I  R  H NL ++  + H   H+ +  H P  +     TP H+++
Sbjct: 446 PATAMARGIAQRLAHQNLQRLHHTHHHAQHQHSQHHHPHSQ--HHHTPHHQQH 496


>AB235207-1|BAF31332.1| 1089|Drosophila melanogaster CG32611
           protein.
          Length = 1089

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 221 PCTKYSSSIFSRFEHSNLFKVKLSAHLDTHRRASRHXPDIEPAFFRTPAHRRY 379
           P T  +  I  R  H NL ++  + H   H+ +  H P  +     TP H+++
Sbjct: 491 PATAMARGIAQRLAHQNLQRLHHTHHHAQHQHSQHHHPHSQ--HHHTPHHQQH 541


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,511,403
Number of Sequences: 53049
Number of extensions: 541614
Number of successful extensions: 1268
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)