Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0378.Seq
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 4.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.5
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 441 NYELFNRNNFSIRYWSWNYRGCCTRL 518
N + N NN+ Y + NY C +L
Sbjct: 87 NRTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 441 NYELFNRNNFSIRYWSWNYRGCCTRL 518
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 441 NYELFNRNNFSIRYWSWNYRGCCTRL 518
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 441 NYELFNRNNFSIRYWSWNYRGCCTRL 518
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 196 YFVGFQNS-EVMINRDNWXYSYCDVRGEILGSSQDELQR 83
Y + N + +IN D +++ DV ILG++ D+L R
Sbjct: 380 YMLALSNRMQKIINND---FNFNDVNFRILGANVDDLMR 415
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 441 NYEL-FNRNNFSIRYWSWNYRGCCTRL 518
NY+ +N NN++ ++ NY C +L
Sbjct: 328 NYKYNYNNNNYNNNNYNNNYNNNCKKL 354
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 661 SKEGSRRANYPLPARGGSDEK*RYG 587
+K S+ AN P PA GG + + G
Sbjct: 1014 AKPQSQEANKPKPATGGKGTRPKRG 1038
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 423 SAAHKCNYELFNRNNFSIRYWSWNY 497
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 423 SAAHKCNYELFNRNNFSIRYWSWNY 497
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 423 SAAHKCNYELFNRNNFSIRYWSWNY 497
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 423 SAAHKCNYELFNRNNFSIRYWSWNY 497
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 423 SAAHKCNYELFNRNNFSIRYWSWNY 497
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,216
Number of Sequences: 438
Number of extensions: 4360
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -