Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0377.Seq
         (605 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g04320.1 68418.m00424 expressed protein                             31   0.78 
At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transfera...    29   3.2  
At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family...    29   3.2  
At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family...    29   3.2  
At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identic...    28   4.2  
At5g02670.1 68418.m00203 expressed protein                             28   5.5  
At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-contain...    27   7.3  
At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family...    27   9.6  
At1g56360.1 68414.m06481 calcineurin-like phosphoesterase family...    27   9.6  

>At5g04320.1 68418.m00424 expressed protein
          Length = 419

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 141 RIDRNKVECCSSLEQESTIKERGLQRQRAKNRLSGRWPLREP 266
           R+   + E C SL +   ++E  ++R+R   RLS R+ ++EP
Sbjct: 249 RLRHEEAEPCKSLHEGDEVRET-IKRRRVSLRLSARFDIQEP 289


>At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 157 RLSVVPVWNKSPLLKNVDSNVKGRKT 234
           R++ VPVW   P+LK+ D  V  R T
Sbjct: 244 RITGVPVWPVGPVLKSPDKKVGSRST 269


>At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 388

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 196 LKNVDSNVKGRKTVYQGDGPYVNHHPN 276
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 128 LYNYMSNPKGQAVLFAGDLSYADDHPN 154


>At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 396

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 196 LKNVDSNVKGRKTVYQGDGPYVNHHPN 276
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 136 LYNYMSNPKGQAVLFAGDLSYADDHPN 162


>At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identical
           to purple acid phosphatase (PAP11) GI:20257484 from
           [Arabidopsis thaliana]
          Length = 441

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 196 LKNVDSNVKGRKTVYQGDGPYVNHHPN 276
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 156 LYNYMSNPKGQAVLFVGDLSYADDHPN 182


>At5g02670.1 68418.m00203 expressed protein 
          Length = 372

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 102 PIGRNRQNPL*IKRIDRNKVECCSSLEQESTIKERGLQRQRAKNRLSGRWPLRE 263
           P+GR + + L   ++ +N  EC S+   +   K   L++    +   G W LRE
Sbjct: 295 PVGRIQSSVLKASQLPKNG-ECASNNRSKKVTKTCWLEKSGKISMYCGNWELRE 347


>At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-containing
           protein low similarity to SP|Q06881 Biotin carboxyl
           carrier protein of acetyl-CoA carboxylase (BCCP)
           {Anabaena sp.}; contains Pfam profile PF00364:
           Biotin-requiring enzyme
          Length = 281

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   NSCAPEWRMANCKR*YFVKIRVK 74
           NSC P WR++N    Y + +R K
Sbjct: 36  NSCVPRWRLSNRNSNYRLVLRAK 58


>At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 466

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 211 SNVKGRKTVYQGDGPYVNHHPN 276
           SN KG+  ++ GD  Y + HPN
Sbjct: 180 SNPKGQAVLFPGDLSYADDHPN 201


>At1g56360.1 68414.m06481 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 466

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 211 SNVKGRKTVYQGDGPYVNHHPN 276
           SN KG+  ++ GD  Y + HPN
Sbjct: 180 SNPKGQAVLFAGDLSYADDHPN 201


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,923,456
Number of Sequences: 28952
Number of extensions: 227383
Number of successful extensions: 482
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)