Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0375.Seq
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   128   5e-32
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   128   5e-32
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    97   1e-22
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.14 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  128 bits (308), Expect = 5e-32
 Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
 Frame = +3

Query: 24  INEPTAAAIAYGLDKKGTG-RTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXXXXXXXX 200
           INEPTAAAIAYGLDKK    R               +     G +   +           
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIF-EVKATAGDTHLGGE 59

Query: 201 XXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGI 380
                  +      +++ K D++ N RALRRLRT CERAKRTLSS+TQASIE+DSLF+GI
Sbjct: 60  DFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGI 119

Query: 381 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
           D+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H++
Sbjct: 120 DYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEI 162



 Score =  105 bits (252), Expect = 3e-25
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = +1

Query: 82  ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*K 258
           ERNVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K K
Sbjct: 20  ERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHK 78



 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +2

Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
           VLVGGSTRIPKVQ+L+ ++FNGKE  +SINPD+
Sbjct: 163 VLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  128 bits (308), Expect = 5e-32
 Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
 Frame = +3

Query: 24  INEPTAAAIAYGLDKKGTG-RTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXXXXXXXX 200
           INEPTAAAIAYGLDKK    R               +     G +   +           
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIF-EVKATAGDTHLGGE 59

Query: 201 XXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGI 380
                  +      +++ K D++ N RALRRLRT CERAKRTLSS+TQASIE+DSLF+GI
Sbjct: 60  DFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGI 119

Query: 381 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
           D+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H++
Sbjct: 120 DYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEI 162



 Score =  105 bits (252), Expect = 3e-25
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = +1

Query: 82  ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*K 258
           ERNVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K K
Sbjct: 20  ERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHK 78



 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +2

Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
           VLVGGSTRIPKVQ+L+ ++FNGKE  +SINPD+
Sbjct: 163 VLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 97.1 bits (231), Expect = 1e-22
 Identities = 59/162 (36%), Positives = 85/162 (52%)
 Frame = +3

Query: 24  INEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXXXXXXXXX 203
           INEPTAAAIAYGLDKKG  +               +     G +                
Sbjct: 1   INEPTAAAIAYGLDKKGAEQNILVYDLGGGTFDVSILTIDNGVF-EVVATSGDTHLGGED 59

Query: 204 XXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGID 383
             Q         V+++ KKD+  +K+AL++LR   E+AKR LSS  + ++ +++L    D
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYD 119

Query: 384 FYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
           F  ++TRA+FEELN D F  T++PV+K L DA M K QI ++
Sbjct: 120 FSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEI 161



 Score = 92.3 bits (219), Expect = 3e-21
 Identities = 37/61 (60%), Positives = 56/61 (91%)
 Frame = +1

Query: 79  AERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*K 258
           AE+N+L+++LGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K K
Sbjct: 18  AEQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHK 77

Query: 259 R 261
           +
Sbjct: 78  K 78



 Score = 61.3 bits (142), Expect = 7e-12
 Identities = 25/33 (75%), Positives = 32/33 (96%)
 Frame = +2

Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
           VLVGGSTRIPK+Q+L++DFF+GKELN+ INPD+
Sbjct: 162 VLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 501 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 400
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 551 LLQDFFNGKELNKSINPD 604
           +  DF NGK L++S   D
Sbjct: 15  IFSDFVNGKTLHRSTRDD 32


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 170 PPPATPTWEVRTL 208
           PP   PTW VR L
Sbjct: 13  PPQEMPTWFVRWL 25


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -3

Query: 668 HPQTCHRAR*QPGQLHHKLRH 606
           HP   H A   P   H+  RH
Sbjct: 121 HPAAAHSALLSPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,147
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)