Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0375.Seq
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 160 1e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 158 6e-40
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 131 1e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 102 6e-23
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 5e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 64 2e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 60 3e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 58 1e-09
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 30 0.27
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 1.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.5
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 27 2.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.5
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 27 2.5
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.4
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 4.4
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.8
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 25 7.7
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 7.7
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 25 7.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 160 bits (389), Expect = 1e-40
Identities = 89/169 (52%), Positives = 104/169 (61%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLRIINEPTAAAIAYGLD+ G + +
Sbjct: 164 GLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGD 223
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
+ + KKD+ N RA+RRLRTACERAKRTLSSS QASIE+D
Sbjct: 224 THLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA ++++
Sbjct: 284 SLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEI 332
Score = 113 bits (272), Expect = 2e-26
Identities = 50/60 (83%), Positives = 58/60 (96%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*KR 261
E NVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK K+
Sbjct: 190 ESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKK 249
Score = 72.5 bits (170), Expect = 5e-14
Identities = 36/58 (62%), Positives = 40/58 (68%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTRIP+VQKL+ DFFNGKE KSINPD+ +L GD SE QDLL
Sbjct: 333 VLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLL 390
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 158 bits (384), Expect = 6e-40
Identities = 88/169 (52%), Positives = 104/169 (61%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLRIINEPTAAAIAYGLD+ T +
Sbjct: 164 GLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGD 223
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
+ + KKD+ N RA+RRLRTACERAKRTLSSS QASIE+D
Sbjct: 224 THLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ ++++
Sbjct: 284 SLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEI 332
Score = 112 bits (269), Expect = 5e-26
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*KR 261
E NVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK K+
Sbjct: 190 ETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKK 249
Score = 72.1 bits (169), Expect = 7e-14
Identities = 36/58 (62%), Positives = 40/58 (68%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTRIP++QKL+ DFFNGKE KSINPD+ IL GD SE QDLL
Sbjct: 333 VLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLL 390
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 131 bits (316), Expect = 1e-31
Identities = 74/169 (43%), Positives = 98/169 (57%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLRIINEPTAAAIAYGLD K +G
Sbjct: 168 GLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGD 227
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
+ + + + K D++ + RALRRLR+ACERAKR LSS TQ ++E+D
Sbjct: 228 THLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVD 287
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HD+
Sbjct: 288 SLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDI 336
Score = 101 bits (241), Expect = 1e-22
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +1
Query: 85 RNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*K 258
+NVLIF+LGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K
Sbjct: 195 KNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQK 252
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSED-VQDLL 682
VLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPD+ +L D QDLL
Sbjct: 337 VLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLL 395
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 102 bits (244), Expect = 6e-23
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNV+RI+NEPTAAAIAYGLDK T + + G + E+
Sbjct: 197 GLNVIRIVNEPTAAAIAYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVF---EVLATS 253
Query: 183 XXXXXXXXXQSHG--QPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIE 356
+ L + D+ + +A+ +L+ E+AKRTLSS IE
Sbjct: 254 GDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIE 313
Query: 357 LDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
++S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I D+
Sbjct: 314 IESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDI 364
Score = 88.6 bits (210), Expect = 7e-19
Identities = 33/57 (57%), Positives = 52/57 (91%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
E+++++++LGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK
Sbjct: 222 EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRK 278
Score = 55.2 bits (127), Expect = 8e-09
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSED 667
VLVGGSTRIPKVQ+LL+ FF GK+ +K INPD+ +L G++ D
Sbjct: 365 VLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD 416
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 82.6 bits (195), Expect = 5e-17
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +1
Query: 91 VLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR 249
V +F+LGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+
Sbjct: 237 VAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKK 289
Score = 71.3 bits (167), Expect = 1e-13
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLR++NEPTAAA+AYGLDKK + + + +R
Sbjct: 210 GLNVLRVVNEPTAAALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRST----- 264
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKK----DLATNKRALRRLRTACERAKRTLSSSTQAS 350
+ L + E KK DL+ ++ A++R+R A E+AK LSS ++
Sbjct: 265 -NGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTD 323
Query: 351 IELDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
I L + I+RA+FE+L L R T++P +++L+DA + ++I+++
Sbjct: 324 ISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEV 380
Score = 35.1 bits (77), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHG 652
+LVGG TR+P+V + ++ F +E KS+NPD+ +L G
Sbjct: 381 ILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG 427
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 63.7 bits (148), Expect = 2e-11
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLN LR++N+ AAA+ YG+ K + + + RG+
Sbjct: 168 GLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKS 227
Query: 183 XXXXXXXXXQSHGQPL----CPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQAS 350
++ + L +E+ K D+ +N +A RL TA ER K+ LS++ A
Sbjct: 228 TVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAP 287
Query: 351 IELDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
+ ++ + ID + I R+ FEEL L P+EK+L A + K ++ +
Sbjct: 288 LNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSI 340
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 85 RNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*K 258
R V I + G + VSI+ G F +KST D +LG + D ++++F EFK K K
Sbjct: 199 RRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYK 256
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +2
Query: 512 LVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
+VGG TR+P V++++ ++F GK L+ ++N D+
Sbjct: 342 MVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 60.1 bits (139), Expect = 3e-10
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +3
Query: 261 DLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGIDFYTSITRARFEELNADLFR 440
DL+ N RAL RL R K LS++++A ++ L +GIDF ITR+ E L D+
Sbjct: 286 DLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMED 345
Query: 441 STMEPVEKSLRDAKMDKAQIHDM 509
+ +EP+ K+L+ A + ++I+ +
Sbjct: 346 AAVEPINKALKKANLTFSEINSI 368
Score = 35.1 bits (77), Expect = 0.009
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
+L GG++RIP +Q L D+ + +++K++N D+
Sbjct: 369 ILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +3
Query: 261 DLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGIDFYTSITRARFEELNADLFR 440
D N R+L +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 276 DPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLN 335
Query: 441 STMEPVEKSLRDAKMDKAQIHDM 509
+ V +++ A M+ I ++
Sbjct: 336 RMADLVTEAVEKANMEPFDISEV 358
Score = 43.6 bits (98), Expect = 3e-05
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
++ V++ G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K
Sbjct: 216 DKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKK 272
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 30.3 bits (65), Expect = 0.27
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = -3
Query: 302 STQTPKSSLVGSEVLFYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTS 123
S+Q P LV + FY + + + + +KSSP K VSP V SK +S V + S
Sbjct: 176 SSQNP--GLVCEQKTFY--QHQFRPFSNLPSNKSSPVKHVSPNVKNNSKKTASSVNSNHS 231
Query: 122 KVPPPSSK 99
+P +K
Sbjct: 232 SIPSSITK 239
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -3
Query: 209 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPSSKISTFRSASTLFVKTVSNRSSS 36
S +S +P+ +S SS +SK SSK S+ S+ T +T S++SSS
Sbjct: 131 STTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSS 188
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 1.9
Identities = 28/92 (30%), Positives = 38/92 (41%)
Frame = -3
Query: 311 LTCSTQTPKSSLVGSEVLFYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRM 132
+T S+ TP SS S +S + + S SS S + +SK SS
Sbjct: 147 ITSSSSTPSSSSSSSSSS-PSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
Query: 131 DTSKVPPPSSKISTFRSASTLFVKTVSNRSSS 36
S P SSK S+ S+S+ T SSS
Sbjct: 206 SKSSASPSSSKSSSKFSSSSFITSTTPASSSS 237
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.5
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 302 STQTPKSSLVGSEVLFYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIP-SSMVRMDT 126
ST + SS S F L+S + ++ S SS P S + +S P SS T
Sbjct: 302 STSSTISSSSSSSSSFSSTLSSSS--MSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTT 359
Query: 125 SKVPPPSSKISTFRSASTLFVKTVSNRSSS 36
S SS ST S+S+ T+++ SSS
Sbjct: 360 SSSKSSSSFSSTVSSSSSTSSSTLTSSSSS 389
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 152 PSSMVRMDTSKVPPPSSKISTFRSASTL 69
PS SK PP S IS++ SASTL
Sbjct: 337 PSGKKFNKNSKFRPPGSTISSYSSASTL 364
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.5
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 308 TCSTQTPKSSLVGSEVLFYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMD 129
+ ST + SS+V + N+ + T S V+P FTS ++ +
Sbjct: 666 SASTPSSNSSIVPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLP 725
Query: 128 TSKVPPPSSKISTF-RSASTLFVKTVSNRSSS 36
TS V P S S + S S+ F + S +SS
Sbjct: 726 TSSVSTPLSNSSAYPSSGSSTFSRLSSTLTSS 757
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = -3
Query: 566 RNLAGASAPWGYEWSHPPVHIVDLSLIHLGITERLLHWLHGRPEQIGVQLLE 411
+ +A A W ++P +V ++ + + ER+ W H E +G+ ++E
Sbjct: 1163 KTMAAELATWRALHNYPKSKVVYIAPMKALVKERVKDWGHRLVEPMGISMIE 1214
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 504 RGFEPYPSWHHGETSPLAP 448
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 179 PAVDFTSKIPSSMVRMDTSKVPPPSSKISTFRSAS 75
P+V FT + + ++R+ S +PPP+ + T S++
Sbjct: 378 PSVMFTMRYLALILRVQNSNMPPPAPRPVTNNSSN 412
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 245 LNSWTKWLTMRLSKSSPPKWVSPAVDF 165
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 209 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPSSKISTFRSASTLFVKTVSNRSSS 36
S S PP S T +P + TS PPP+S ST S+S L + S +S+
Sbjct: 342 STSIPPTGNS-TTPVTPTVPPTSTS-STSTPPPPASTSSTGTSSSPLLSTSTSCTTST 397
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 KRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALN*ILSLR 375
K+ LP E + + + V G GP H+PH R L + LR
Sbjct: 11 KKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 494
SL G+D+YT I E +A +S+ E +K D + D++
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRS 372
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 25.4 bits (53), Expect = 7.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 71 GYWQNEMYLSLNSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRG 250
G+ + +Y SA V + CP+LP+ + + +P P T T + T S T + +
Sbjct: 133 GFIRGVVYTFGYSAQVIAQCPNLPTCIFHVKFSPNP-TQTSPGKPSTSESSQTDTSTRPA 191
Query: 251 NKKGPRYQQESS 286
N + P + SS
Sbjct: 192 NSQTPTTTRASS 203
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 113 AVPSTCPSLPSRMVSSR*NPPPATPTW 193
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,958,569
Number of Sequences: 5004
Number of extensions: 62911
Number of successful extensions: 284
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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