Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0375.Seq
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 186 2e-47
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 181 5e-46
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 150 8e-37
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 148 4e-36
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 148 4e-36
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 118 3e-27
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 117 7e-27
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 117 7e-27
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 86 3e-17
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 83 1e-16
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 81 9e-16
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 50 2e-06
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 42 3e-04
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 37 0.012
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 30 1.3
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 30 1.3
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 29 2.3
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 24 8.9
Z92864-3|CAB07434.1| 48|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 186 bits (452), Expect = 2e-47
Identities = 103/170 (60%), Positives = 116/170 (68%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTG-RTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXX 179
GLNVLRIINEPTAAAIAYGLDKKG G R + G +
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 226
Query: 180 XXXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIEL 359
+ C + + KKDLA+N RALRRLRTACERAKRTLSSS+QASIE+
Sbjct: 227 THLGGEDFDNRMVNH-FCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEI 285
Query: 360 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
DSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HD+
Sbjct: 286 DSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDI 335
Score = 118 bits (285), Expect = 3e-27
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*KR 261
ERNVLIF+LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRK K+
Sbjct: 193 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKK 252
Score = 81.4 bits (192), Expect = 5e-16
Identities = 41/58 (70%), Positives = 43/58 (74%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTRIPKVQKLL D F+GKELNKSINPD+ IL GDKSE VQDLL
Sbjct: 336 VLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 393
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 181 bits (440), Expect = 5e-46
Identities = 101/170 (59%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTG-RTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXX 179
GLNVLRIINEPTAAAIAYGLDKKG G R + G +
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 226
Query: 180 XXXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIEL 359
+ C + + KKDLA+N RALRRLRTACERA TLSSS QASIE+
Sbjct: 227 THLGGEDFDNRMVNH-FCAEFKRKHKKDLASNPRALRRLRTACERANETLSSSCQASIEI 285
Query: 360 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
DSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HD+
Sbjct: 286 DSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDI 335
Score = 118 bits (285), Expect = 3e-27
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*KR 261
ERNVLIF+LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRK K+
Sbjct: 193 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKK 252
Score = 81.4 bits (192), Expect = 5e-16
Identities = 41/58 (70%), Positives = 43/58 (74%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTRIPKVQKLL D F+GKELNKSINPD+ IL GDKSE VQDLL
Sbjct: 336 VLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLL 393
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 150 bits (364), Expect = 8e-37
Identities = 83/170 (48%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXX-VHPYHRGWYLRGEIXXX 179
GLN +RIINEPTAAA+AYGLDK T + G +
Sbjct: 166 GLNAIRIINEPTAAALAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAG 225
Query: 180 XXXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIEL 359
Q + + KD+++N RA+RRLRTACERAKRTLSSST+A++E+
Sbjct: 226 DTHLGGEDFDSRVLQHFMTEFKRKTGKDISSNPRAIRRLRTACERAKRTLSSSTEATVEV 285
Query: 360 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDAK DK +I ++
Sbjct: 286 DSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKTDKGRIDEV 335
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/58 (77%), Positives = 54/58 (93%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
E+N+LIF+LGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD+R++ HF+ EFKRK
Sbjct: 192 EKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDSRVLQHFMTEFKRK 249
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTRIPK+QKLL++FFNGK+LN SINPD+ +L G K + ++D+L
Sbjct: 336 VLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVL 393
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 148 bits (358), Expect = 4e-36
Identities = 83/170 (48%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK-GTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXX 179
GLN +RIINEPTAAA+AYGLDK + + G +
Sbjct: 166 GLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAG 225
Query: 180 XXXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIEL 359
Q Q + + KD++ N RA+RRLRTACERAKRTLSSS++A +E+
Sbjct: 226 DTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEV 285
Query: 360 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++
Sbjct: 286 DSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEV 335
Score = 101 bits (242), Expect = 5e-22
Identities = 47/58 (81%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
E+NVLIF+LGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+ HF+ EFKRK
Sbjct: 192 EKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRK 249
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTR+PK+QKLL+DFFNGKELN SINPD+ +L G K E ++D+L
Sbjct: 336 VLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVL 393
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 148 bits (358), Expect = 4e-36
Identities = 83/170 (48%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK-GTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXX 179
GLN +RIINEPTAAA+AYGLDK + + G +
Sbjct: 166 GLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAG 225
Query: 180 XXXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIEL 359
Q Q + + KD++ N RA+RRLRTACERAKRTLSSS++A +E+
Sbjct: 226 DTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEV 285
Query: 360 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++
Sbjct: 286 DSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEV 335
Score = 101 bits (242), Expect = 5e-22
Identities = 47/58 (81%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
E+NVLIF+LGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+ HF+ EFKRK
Sbjct: 192 EKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRK 249
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDLL 682
VLVGGSTR+PK+QKLL+DFFNGKELN SINPD+ +L G K E ++D+L
Sbjct: 336 VLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVL 393
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 118 bits (285), Expect = 3e-27
Identities = 69/169 (40%), Positives = 95/169 (56%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNV+RIINEPTAAAIAYGLDKK R + G +
Sbjct: 194 GLNVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGTFDVSLLTIDSGVF-EVLATNGD 252
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
Q + +++ KDL + RA+++LR E+AKR LS+ Q IE++
Sbjct: 253 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIE 312
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M K +H++
Sbjct: 313 SLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKTDVHEI 361
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/57 (64%), Positives = 51/57 (89%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
ERN+L+F+LGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++ +K+K
Sbjct: 219 ERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKK 275
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
VLVGGSTRIPKVQ+L++D+FNGKE ++ INPD+
Sbjct: 362 VLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDE 394
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 117 bits (282), Expect = 7e-27
Identities = 67/169 (39%), Positives = 96/169 (56%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNV+RIINEPTAAAIAYGLDKK R + G +
Sbjct: 197 GLNVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGTFDVSMLTIDNGVF-EVLATNGD 255
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
Q + +++ KDL +KRA+++LR E+AKR LS+ Q +E++
Sbjct: 256 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIE 315
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H++
Sbjct: 316 SLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEI 364
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/57 (64%), Positives = 52/57 (91%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
ERN+L+F+LGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ +F++ +K+K
Sbjct: 222 ERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKK 278
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDK 658
VLVGGSTRIPKVQ+L+++FFNGKE ++ INPD+ ++ G++
Sbjct: 365 VLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEE 414
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 117 bits (282), Expect = 7e-27
Identities = 67/169 (39%), Positives = 96/169 (56%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNV+RIINEPTAAAIAYGLDKK R + G +
Sbjct: 197 GLNVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGTFDVSMLTIDNGVF-EVLATNGD 255
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELD 362
Q + +++ KDL +KRA+++LR E+AKR LS+ Q +E++
Sbjct: 256 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIE 315
Query: 363 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H++
Sbjct: 316 SLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEI 364
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/57 (64%), Positives = 52/57 (91%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
ERN+L+F+LGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ +F++ +K+K
Sbjct: 222 ERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKK 278
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDK 658
VLVGGSTRIPKVQ+L+++FFNGKE ++ INPD+ ++ G++
Sbjct: 365 VLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEE 414
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 85.8 bits (203), Expect = 3e-17
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLR+INEPTAAA+AYGLDK + + +G + E+
Sbjct: 191 GLNVLRVINEPTAAALAYGLDKDAGDKIIAVYDLGGGTFDVSILEIQKGVF---EVKSTN 247
Query: 183 XXXXXXXXXQSHG--QPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIE 356
H L ++E DL + +A++RLR A E+AK LSS+TQ I
Sbjct: 248 GDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDIN 307
Query: 357 LDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
L + +TRA+FE++ DL + T+EP K+L DA++ +QI D+
Sbjct: 308 LPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADV 362
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
++ + +++LGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H V EFK++
Sbjct: 216 DKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKE 272
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSE 664
+LVGG +R+PKVQ +Q+ F GK +K++NPD+ +L GD ++
Sbjct: 363 LLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGDVTD 413
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = +1
Query: 82 ERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
++ + +++LGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H V EFK++
Sbjct: 216 DKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKE 272
Score = 82.6 bits (195), Expect = 2e-16
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GLNVLR+INEPTAAA+AYGLDK + + +G + E+
Sbjct: 191 GLNVLRVINEPTAAALAYGLDKDAGDKIIAVYDLGGGTFDVSILEIQKGVF---EVKSTN 247
Query: 183 XXXXXXXXXQSHG--QPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIE 356
H L ++E DL + +A++RLR A E+AK LSS+TQ I
Sbjct: 248 GDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDIN 307
Query: 357 LDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
L + +TRA+FE++ DL + T+EP L DA++ +QI D+
Sbjct: 308 LPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQIADV 362
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSE 664
+LVGG +R+PKVQ +Q+ F GK +K++NPD+ +L GD ++
Sbjct: 363 LLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGDVTD 413
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 80.6 bits (190), Expect = 9e-16
Identities = 62/173 (35%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GL VLRI+NEPTAAAIAY L + R G I
Sbjct: 163 GLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVDG----PRITVKA 218
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKK----DLATNKRALRRLRTACERAKRTLSSSTQAS 350
Q + + EE K DL N RAL+R+R A E AK TLS+S+ A
Sbjct: 219 KGGDTHLGGQDIDNIIMIKMLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVAR 278
Query: 351 IELDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
IEL+ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI+++
Sbjct: 279 IELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQINEI 331
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 79 AERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
+ RN+LI++LGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ ++EFK +
Sbjct: 188 SRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLEEFKNR 245
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDL 679
VLVGGSTRIP ++ ++ Q F + + +SI+PD+ +L G +E+VQD+
Sbjct: 332 VLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDM 387
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 80.6 bits (190), Expect = 9e-16
Identities = 62/173 (35%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXX 182
GL VLRI+NEPTAAAIAY L + R G I
Sbjct: 163 GLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVDG----PRITVKA 218
Query: 183 XXXXXXXXXQSHGQPLCPGVQEEIKK----DLATNKRALRRLRTACERAKRTLSSSTQAS 350
Q + + EE K DL N RAL+R+R A E AK TLS+S+ A
Sbjct: 219 KGGDTHLGGQDIDNIIMIKMLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVAR 278
Query: 351 IELDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
IEL+ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI+++
Sbjct: 279 IELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQINEI 331
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 79 AERNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
+ RN+LI++LGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ ++EFK +
Sbjct: 188 SRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLEEFKNR 245
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDDXXXXXXXXXXXILHGDKSEDVQDL 679
VLVGGSTRIP ++ ++ Q F + + +SI+PD+ +L G +E+VQD+
Sbjct: 332 VLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDM 387
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +1
Query: 88 NVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK*KRT 264
NV++ +LGGGT DVS+L ++ G+F ++ AG+ LGG+DF++R+ H + + K +T
Sbjct: 228 NVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQKHLISKIAEKFGKT 286
Score = 54.4 bits (125), Expect = 7e-08
Identities = 44/168 (26%), Positives = 74/168 (44%)
Frame = +3
Query: 6 LNVLRIINEPTAAAIAYGLDKKGTGRTKCXXXXXXXXXXXXVHPYHRGWYLRGEIXXXXX 185
+ V R+I+EPTAAA+AYGL KK V G ++ +
Sbjct: 202 MEVRRVISEPTAAALAYGLHKKQGVENVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNR 261
Query: 186 XXXXXXXXQSHGQPLCPGVQEEIKKDLATNKRALRRLRTACERAKRTLSSSTQASIELDS 365
+ + L + E+ K + NK ++++R E+ K L++ +I L+
Sbjct: 262 LGGQDFNDRVQ-KHLISKIAEKFGKTI-DNKEDIQQIRMEVEKGKIRLTNVPSTTISLNL 319
Query: 366 LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDM 509
G Y +TR FE LN DL ++ P+ +L DA +D A + ++
Sbjct: 320 KTVGKWNY-ELTRDEFETLNGDLLKAIELPITAALADANLDTADVDEI 366
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 604
VLVGGST++P V+K++ FF K N ++P+
Sbjct: 367 VLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 51.2 bits (117), Expect = 7e-07
Identities = 30/111 (27%), Positives = 55/111 (49%)
Frame = +3
Query: 258 KDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGIDFYTSITRARFEELNADLF 437
KD++TN RA+ +L ER K+ LS++ +++SLFE +F +TR E++ DL
Sbjct: 273 KDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLE 332
Query: 438 RSTMEPVEKSLRDAKMDKAQIHDMYWWVAPLVSPRCRSSCKISLMERSSTN 590
P+ ++ A++ I + A P+ + K L ++ +N
Sbjct: 333 PRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISN 383
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
VL+G TR+PKV+++L+ KE++ +N D+
Sbjct: 357 VLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK 71
GLN+L+++N+ +AAA+ YG+ ++
Sbjct: 172 GLNLLQLLNDGSAAALNYGVFRR 194
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 30/111 (27%), Positives = 55/111 (49%)
Frame = +3
Query: 258 KDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGIDFYTSITRARFEELNADLF 437
KD++TN RA+ +L ER K+ LS++ +++SLFE +F +TR E++ DL
Sbjct: 289 KDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLE 348
Query: 438 RSTMEPVEKSLRDAKMDKAQIHDMYWWVAPLVSPRCRSSCKISLMERSSTN 590
P+ ++ A++ I + A P+ + K L ++ +N
Sbjct: 349 PRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISN 399
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 509 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
VL+G TR+PKV+++L+ KE++ +N D+
Sbjct: 373 VLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK 71
GLN+L+++N+ +AAA+ YG+ ++
Sbjct: 188 GLNLLQLLNDGSAAALNYGVFRR 210
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +3
Query: 255 KKDLATNKRALRRLRTACERAKRTLSSSTQASIELDSLFEGIDFYTSITRARFEELNADL 434
K + TN+RA+ + ER K+ LS++ + +++S E ID +TR F L +D+
Sbjct: 285 KTKVNTNRRAMTKFSKEAERLKQVLSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDM 344
Query: 435 FRSTMEPVEKSLRDAKM 485
EP+E++LR A++
Sbjct: 345 ESRFGEPIEQALRMAQI 361
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 503 RYVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
++VL+G TR+PKVQ+++Q KE+ K +N D+
Sbjct: 368 QFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK 71
GL VL++IN+ TAAA+++G+ ++
Sbjct: 188 GLTVLQLINDGTAAALSHGIFRR 210
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +2
Query: 533 IPKVQKLLQDFFNGKELNKSINPDD 607
IPKVQ+L++D+FNGKE ++ INPD+
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDE 25
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 85 RNVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 252
RNV+ ++G + S++ G ++ +T+ D GG FD + HF +EFK K
Sbjct: 198 RNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFDALIREHFRKEFKTK 253
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 3 GLNVLRIINEPTAAAIAYGLDKK 71
GLN LRI+NE TA A+AYG+ K+
Sbjct: 166 GLNSLRIVNETTAIALAYGIYKQ 188
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +2
Query: 512 LVGGSTRIPKVQKLLQDFFNGKELNKSINPDD 607
+VGGS+RIP ++++++D F GKE ++N D+
Sbjct: 343 IVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 530 EWSHPPVHIVDLSLIHLGITE-RLLHWLHGRP 438
+W H H+VD ++ G T RL+H L+G+P
Sbjct: 1537 KWQHVQNHVVDSKIVLPGATSIRLVHQLNGKP 1568
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 104 NSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNKKGPRYQQES 283
+S A S+ P +P R+ + +TPT V+T T ST S SS K + QQ+S
Sbjct: 534 SSTATVSSIPLVP-RLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSSSAKKTAAQLQQQS 592
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 104 NSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNKKGPRYQQES 283
+S A S+ P +P R+ + +TPT V+T T ST S SS K + QQ+S
Sbjct: 531 SSTATVSSIPLVP-RLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSSSAKKTAAQLQQQS 589
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 104 NSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNKKGPRYQQES 283
+S A S+ P +P R+ + +TPT V+T T ST S SS K + QQ+S
Sbjct: 534 SSTATVSSIPLVP-RLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSSSAKKTAAQLQQQS 592
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 104 NSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNKKGPRYQQES 283
+S A S+ P +P R+ + +TPT V+T T ST S SS K + QQ+S
Sbjct: 531 SSTATVSSIPLVP-RLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSSSAKKTAAQLQQQS 589
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3
Query: 230 KWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPSSKISTFRSASTLFVKTVS 51
KW TM S KW A + S+ M + P SSK S+ +++ + S
Sbjct: 591 KWKTM--SSDDKKKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSS 648
Query: 50 NRSSSRFIDDSEN 12
S +I DS++
Sbjct: 649 KAISKEYISDSDD 661
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 23.8 bits (49), Expect(2) = 8.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 597 LIDLLSSFPLKKSCRSFCTLGIRVEPPTSTYRGFEPYP 484
LIDLL F + R L V+ YR F YP
Sbjct: 949 LIDLLKRFRVSNDRRERLVLACVVKNLFEEYRFFHEYP 986
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 381 QYPQRENLIQCSLVWTMTRSSLPSHMQYANA 289
+YP+RE ++ + R + S++Q+A A
Sbjct: 984 EYPERELRTTAAVYGGIIREDIISNVQFATA 1014
>Z92864-3|CAB07434.1| 48|Caenorhabditis elegans Hypothetical
protein Y65A5A.3 protein.
Length = 48
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 191 KWVSPAVDFTSKIPS-SMVRMDTSKVPPPSSKISTFRS 81
+W+ A F + P+ S++ + PPP SKIS RS
Sbjct: 10 RWMQTASRFVDEYPNFSVLPPPPLRAPPPHSKISDRRS 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,735,092
Number of Sequences: 27780
Number of extensions: 365360
Number of successful extensions: 1260
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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