Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0371.Seq
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0063 - 25523140-25524405 34 0.11
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257 32 0.61
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 31 0.80
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 31 1.4
10_08_0659 + 19647037-19647464,19647569-19647659,19648998-196490... 30 1.9
12_02_0046 + 12830974-12832386 30 2.5
10_08_0603 - 19120434-19120538,19121209-19121310,19121430-191214... 29 3.2
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 4.3
10_08_0802 + 20680685-20681059,20681218-20681353,20682047-206821... 29 4.3
09_04_0002 - 13567257-13567373,13568049-13568243,13569750-135698... 29 4.3
02_05_0267 - 27284781-27284957,27285082-27285126,27285858-272859... 29 4.3
10_08_0844 - 20963774-20963792,20964111-20964256,20964787-209649... 29 5.7
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 29 5.7
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 5.7
06_01_0384 - 2758250-2758312,2758349-2758837,2760490-2761119 29 5.7
04_03_0714 + 18986706-18987257 29 5.7
12_02_1147 - 26459481-26460124,26460241-26460382,26461658-264616... 28 7.5
09_03_0089 + 12265916-12267232 28 7.5
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 28 7.5
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 28 7.5
02_02_0138 + 7114949-7115656,7116388-7116435,7116830-7117988,711... 28 7.5
12_02_0640 - 21447470-21448309 28 9.9
12_02_0635 - 21430245-21431156 28 9.9
07_01_0091 - 692416-693906 28 9.9
01_05_0331 - 21057957-21058205,21059213-21059791 28 9.9
01_05_0042 - 17500897-17500953,17501560-17501765,17502055-175022... 28 9.9
>02_05_0063 - 25523140-25524405
Length = 421
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 461 VLGEAKEGSKRAAPAFSITGRG-KFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRR 285
V G A+ R + F G +F+E G PGP ++ RAAAA A + P R
Sbjct: 153 VFGPARRDLLRCSAEFLPKGPPPEFAEDPGAGPGPSSWKRKRAAAAAANTFAADAVKPIR 212
Query: 284 ELKPPTA 264
+KP A
Sbjct: 213 TVKPRAA 219
>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
Length = 421
Score = 31.9 bits (69), Expect = 0.61
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -1
Query: 482 NTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAF 303
NT + PV AA A ++ GK E KG P T +TD A + T PPA
Sbjct: 290 NTSAATPVANNKPPPPPVAATATTL---GKKGEGKG--KAPTTTSTDHAGSTNTSAPPAA 344
Query: 302 TMAPRRELKPPTAAVP 255
P PPT P
Sbjct: 345 NYQP-----PPTTTTP 355
>01_06_1670 - 39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 268 VGGFSSRLGAIVKAGGRFVNAAAALSVVYVPGPGINPLASENFPRPVILKAG 423
V F S L + K GR + A SV + P P +NP+ + FPR L+AG
Sbjct: 896 VRDFLSVLDQVCKEVGRINDRTIASSVRHFPVP-VNPMMPQLFPRIHALRAG 946
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 250 GTGTAAVG-GFSSRLGAIVKAGGRFVNAAAALSVVYVPGPGINPLASENF 396
G G AA G GFSS A++ A + V A A+++V +P PGI+ ++ E+F
Sbjct: 1705 GFGGAAQGSGFSSV--ALMHAP-KIVLRALAVAIVELPAPGIDTISQEHF 1751
>10_08_0659 +
19647037-19647464,19647569-19647659,19648998-19649039,
19649179-19649237,19649559-19649634,19649735-19649866,
19650251-19650358,19651040-19651094,19651187-19651437
Length = 413
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 274 GFSSRLGAIVKAGGRFVNAAAALSVVYVPGPG-INPLASENF 396
GFSS G + A G +AAAA V P PG + A+++F
Sbjct: 81 GFSSAAGEVDAAAGVLADAAAAAEAVPAPFPGEVAAAAADSF 122
>12_02_0046 + 12830974-12832386
Length = 470
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 368 PGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPECIVLRRQTGFTKRSPSNTQ 189
P P + T AA A ++ P T LK P VP P C ++ G SP+ Q
Sbjct: 245 PAPPSLRTAPAAVAPPRQVPVITQQQAPPLKRPAPPVPSPPC--AKKIRGPVSASPAARQ 302
>10_08_0603 -
19120434-19120538,19121209-19121310,19121430-19121462,
19122049-19122216,19122311-19122373,19122514-19122624,
19122926-19123035,19123150-19123446,19123632-19123710,
19123811-19123919,19124000-19124041,19124743-19124873,
19126150-19126797
Length = 665
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = -1
Query: 425 APAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPE 246
+PA S T +F P P + A L +R PA T ++ KPP A VP+PE
Sbjct: 91 SPAPSATTPRRFFRRPFPPPSPAKHIKASLARRLGQRSPA-TAQAQQAAKPP-AEVPIPE 148
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Frame = -1
Query: 497 TAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFS--EAKGLMPGPGTYTTDRAAAAL 324
TA P T P VL AP + ++ + + P P + T R AA +
Sbjct: 76 TATDPTTSLPPAVLVPVSATWAPHAPHYLFLHANPYAYTSTRRVFPSPPSPTRRRFAATV 135
Query: 323 T--------KRPPAFTMAPRRELKPPTAAVPVPEC 243
+RPP + +P R P+ P P C
Sbjct: 136 AAASRLGFRRRPPLYEQSPHRRQPGPSPPPPPPRC 170
>10_08_0802 +
20680685-20681059,20681218-20681353,20682047-20682180,
20682722-20682827,20683227-20683312,20683648-20683836,
20684349-20684522,20684638-20684751,20684887-20685141
Length = 522
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 616 PPPESRKPRAPAFTF-GQKLDPLANIAKAGPGPA 518
PPP+ PR P+FT + ++ A A P PA
Sbjct: 27 PPPQPHHPRRPSFTLNAHQAAASSSAASAAPAPA 60
>09_04_0002 -
13567257-13567373,13568049-13568243,13569750-13569869,
13569958-13570028,13570066-13570126,13570170-13570202,
13570303-13570431,13571958-13572042,13572143-13572252,
13572534-13572606,13572688-13572810,13573111-13573289,
13573659-13573736,13573813-13573871,13574122-13574212,
13574265-13574442,13574553-13575088
Length = 745
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 493 LKHPILILCHRYLAKRKKGVKEL 425
LK P++ LC RYLA+ KK K L
Sbjct: 405 LKSPLMRLCARYLAREKKRGKAL 427
>02_05_0267 -
27284781-27284957,27285082-27285126,27285858-27285923,
27286043-27286114,27286225-27286350,27286563-27287217,
27287313-27287521
Length = 449
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/73 (21%), Positives = 29/73 (39%)
Frame = -3
Query: 270 HCSGSRPGVYCPEKTNGVYKEKSIKYTVSSKMKLERVDQIPAPNAYCPEKADRILREKSP 91
H G G T G Y+E + S + E +++PA Y A L +
Sbjct: 61 HGHGWSHGELSNSTTGGGYRENFLDLLASKNVTPEMFEEVPASEHYNVAPAGTTLTTTAR 120
Query: 90 AFSFRTKSEITKV 52
+F +S+++ +
Sbjct: 121 SFDHHARSDVSPI 133
>10_08_0844 -
20963774-20963792,20964111-20964256,20964787-20964962,
20965061-20965216,20965287-20967102
Length = 770
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 323 TKRPPAFTMAPRRELKPPTAAVPVPE 246
++RPPA +A R +PPTA PE
Sbjct: 28 SRRPPAARLAATRRFRPPTADDEPPE 53
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -1
Query: 389 SEAKGLMPGPGTYTTDRA---AAALTKRPPAFTMAPRRELKPPTAAVPVPECIV 237
S+A +MP P T R R P F AP RE+ PP P P +V
Sbjct: 815 SKANQIMP-PHAADTSRGLLPTPPALARLPTFNNAPAREMLPPAPKNPEPPVVV 867
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -1
Query: 428 AAPAFS-ITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPV 252
AAP+ + +T R F L+P PGT + A PP ++ P P
Sbjct: 36 AAPSLAPLTLRAAFVSFPALLPRPGTSGSALPRPARAGFPPRCPLSHASTAAPFPTQPPF 95
Query: 251 PECIVLRRQTGFTKRSP 201
P + L T F + P
Sbjct: 96 PSSLPLPSSTRFGQPDP 112
>06_01_0384 - 2758250-2758312,2758349-2758837,2760490-2761119
Length = 393
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/68 (22%), Positives = 37/68 (54%)
Frame = -3
Query: 255 RPGVYCPEKTNGVYKEKSIKYTVSSKMKLERVDQIPAPNAYCPEKADRILREKSPAFSFR 76
R V+ + + +++ T + K++L ++PA ++ EK ++R K+PA++ +
Sbjct: 224 RTPVHAADSSGLAQQQEEAVATAAGKVQLGVFTEVPAISSQRREKLAVMVRVKAPAYTKQ 283
Query: 75 TKSEITKV 52
T++ + V
Sbjct: 284 TRAPLDLV 291
>04_03_0714 + 18986706-18987257
Length = 183
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -1
Query: 437 SKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAV 258
S AA + + G G A GL G G+ + AAAL + ++ P + P AAV
Sbjct: 19 SAAAAASRVLCGGGGGDAAAGLGGGGGSVDSSGGAAALDL-DLSMSIGPTTRRQQPAAAV 77
Query: 257 PVP 249
P P
Sbjct: 78 PSP 80
>12_02_1147 -
26459481-26460124,26460241-26460382,26461658-26461699,
26463377-26463502
Length = 317
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 452 EAKEGSKRAAPAFSITGRGKFSEAKGLMP----GPGTYTTDRAAAALTKRPPAFTMA--- 294
+AK AAP G K +AK P P + T+ +A P A
Sbjct: 223 DAKPAESEAAPPAPSEGGEKKEDAKPAEPEAAAAPPSNPTEPSAPKAAAAAPVENSADKG 282
Query: 293 PRRELKPPTAAVPVPE 246
P ++ +PP+AA P E
Sbjct: 283 PHQDSQPPSAAAPAKE 298
>09_03_0089 + 12265916-12267232
Length = 438
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/82 (29%), Positives = 34/82 (41%)
Frame = -1
Query: 425 APAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPE 246
APA S+ R +F L P P + AA P + + P + K PTAA P P
Sbjct: 179 APAASL--RTRFDH---LFPSPASALRSAAAGDPASSLPPYLLRPFAQ-KLPTAASPFPP 232
Query: 245 CIVLRRQTGFTKRSPSNTQFQA 180
T + +PS++ A
Sbjct: 233 YTSSSSSTPLSTSTPSSSNLAA 254
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -1
Query: 404 GRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVP 249
GRG +G G G AAA P R PPT AV +P
Sbjct: 79 GRGDGGRGRGRGGGGGDGVRPAMAAAPAASTPGPVAVAARSTPPPTPAVQIP 130
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 368 PGPGTYTTDRAAAALTKRPPAFTMAPRRELKPP 270
PGPG ++AA + PP PR E PP
Sbjct: 46 PGPGARNPAASSAAAFRPPPQPQQQPRVETPPP 78
>02_02_0138 +
7114949-7115656,7116388-7116435,7116830-7117988,
7118336-7118424,7118697-7118732
Length = 679
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 307 AGGRFVNAAAALSVVYVPGPGINPLASENFPRP-VILKAGAALLLPSFASPS 459
A R A +L+V P P PL +P P L AA +L S ASPS
Sbjct: 14 AAARPSPAGPSLTVTVAPTPPPTPLDPRGYPLPRRHLVCAAARILRSHASPS 65
>12_02_0640 - 21447470-21448309
Length = 279
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 428 AAPAFSIT--GRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKP 273
AA +FS++ R A +MP P TT + ++RPPA T P R P
Sbjct: 170 AATSFSVSVYTRHAAKRAAAVMPPP---TTKKKKPQSSRRPPARTPPPERRESP 220
>12_02_0635 - 21430245-21431156
Length = 303
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 428 AAPAFSIT--GRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKP 273
AA +FS++ R A +MP P TT + ++RPPA T P R P
Sbjct: 167 AATSFSVSVYTRHAAKRAAAVMPPP---TTKKKKPQSSRRPPARTPPPERRESP 217
>07_01_0091 - 692416-693906
Length = 496
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -2
Query: 616 PPPESRKPRAPAFTFGQKLDP-LANIAKAGPGPASYNQKE*LLKHPILILCHRYLAKRKK 440
PPP PRAP + L P +A +A P PA + + P+ +R +A+ +
Sbjct: 224 PPPPPPAPRAPVYHHPLPLGPRVAVLAAPAPRPARHAPVRARVAPPV----YRAVARAEP 279
Query: 439 GVKELHRLSVSQVVE 395
+ H V+ V+
Sbjct: 280 AAAQTHWALVATAVD 294
>01_05_0331 - 21057957-21058205,21059213-21059791
Length = 275
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +1
Query: 250 GTGTAAVGGFSSRLGAIVKAGGRFVNAAAALSVVYVPGPGINPLASENFPRPVILKAGAA 429
G G A F+ ++ A + A+ V + G LA+E FP V A
Sbjct: 54 GVGGAPASSFADHARPLLDAVRALPDGERAVLVGHSFGGMSVALAAETFPDKVAAAVFVA 113
Query: 430 LLLPSFASPSTGGIE*VLGA 489
LP A+P + I+ V+ +
Sbjct: 114 AFLPDCANPPSHPIDTVINS 133
>01_05_0042 -
17500897-17500953,17501560-17501765,17502055-17502293,
17502386-17502442,17504214-17504672,17507866-17508377
Length = 509
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 205 LLFVNPVCLLRTIHSGTGTAAVGGFSSRLGAIVKAGGRFVNAAAALSVV 351
++ ++ V L+ + G GTAA S+ LGA G R V ALSV+
Sbjct: 322 MICISTVVLVYNLPHGIGTAASVRVSNELGAGNPEGARLV-VGVALSVI 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,536,444
Number of Sequences: 37544
Number of extensions: 501042
Number of successful extensions: 1534
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -