Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0371.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 32 0.55
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 32 0.55
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 5.1
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 29 5.1
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 28 6.7
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 28 6.7
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 28 6.7
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.9
U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical p... 28 8.9
U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical p... 28 8.9
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 28 8.9
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 28 8.9
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 8.9
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -1
Query: 512 QSEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAA 333
+S + A+ T +M PV+ + P F I F + G+ PGT T +
Sbjct: 253 RSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPGTLPTTKVD 312
Query: 332 AALTKRPPAFTMAP 291
A+ P A+ AP
Sbjct: 313 ASKWNDPSAYATAP 326
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -1
Query: 512 QSEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAA 333
+S + A+ T +M PV+ + P F I F + G+ PGT T +
Sbjct: 255 RSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPGTLPTTKVD 314
Query: 332 AALTKRPPAFTMAP 291
A+ P A+ AP
Sbjct: 315 ASKWNDPSAYATAP 328
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 401 RGKFSEAKGL-MPGPGT---YTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPECIVL 234
R K E K + MP P + Y T RA A + P+ AP +P AAV P+
Sbjct: 287 RSKSQETKLVAMPSPNSMAYYNTSRARNAGLRPAPS---APPLSPEPAIAAVKTPKTPTT 343
Query: 233 RRQTGFTKRSPSNT 192
+ + +SP+NT
Sbjct: 344 PKTSKGRSKSPANT 357
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 401 RGKFSEAKGL-MPGPGT---YTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPECIVL 234
R K E K + MP P + Y T RA A + P+ AP +P AAV P+
Sbjct: 287 RSKSQETKLVAMPSPNSMAYYNTSRARNAGLRPAPS---APPLSPEPAIAAVKTPKTPTT 343
Query: 233 RRQTGFTKRSPSNT 192
+ + +SP+NT
Sbjct: 344 PKTSKGRSKSPANT 357
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -1
Query: 395 KFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPECIVLRRQTGF 216
K+ KG +Y + AL P F AP+R P AA+ P+ TG
Sbjct: 3 KYEPRKGADDEESSYLEQSNSPALACPAPIFAPAPQR-ASPWPAALASPQQTTFTSPTGL 61
Query: 215 TKRSPS 198
+ PS
Sbjct: 62 SSSGPS 67
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -1
Query: 395 KFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPVPECIVLRRQTGF 216
K+ KG +Y + AL P F AP+R P AA+ P+ TG
Sbjct: 3 KYEPRKGADDEESSYLEQSNSPALACPAPIFAPAPQR-ASPWPAALASPQQTTFTSPTGL 61
Query: 215 TKRSPS 198
+ PS
Sbjct: 62 SSSGPS 67
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 243 YCPEKTNGVYKEKSIKYTVSSKMKLERVDQIPAPNAYC 130
Y P+K NGVY+ + + S ++K E+ +P YC
Sbjct: 94 YLPDKDNGVYECSAPGMSASYRLKGEKKHILPEGFRYC 131
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -3
Query: 210 EKSIKYTVSSKMKLERVDQIPAPNAYCPEKADRILREKSPAFSFRTKSEIT-----KVHD 46
EKSI T++ + + QI P+ +D L K+P FSFRT + + K+H
Sbjct: 256 EKSIFSTINVQKCAPKKHQISIFPPKKPKNSDFPL--KNPQFSFRTVTSVASTFTQKLHV 313
Query: 45 APAPNIYSPEKKKKK 1
APA S +K+ KK
Sbjct: 314 APASR-NSKKKRGKK 327
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -1
Query: 362 PGTYTTDRAAAALTKRPPAFTMAPR----RELK-PPTAAVPV 252
P Y D +A A T +PPAF PR + K PP +VP+
Sbjct: 93 PRNYFQDWSAIASTSQPPAFPPPPRPPKPEQYKFPPAPSVPL 134
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -1
Query: 362 PGTYTTDRAAAALTKRPPAFTMAPR----RELK-PPTAAVPV 252
P Y D +A A T +PPAF PR + K PP +VP+
Sbjct: 93 PRNYFQDWSAIASTSQPPAFPPPPRPPKPEQYKFPPAPSVPL 134
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 359 GTYTTD-RAAAALTKRPPAFTMAPRRELK 276
G YT + + +A T +PP FT+AP E+K
Sbjct: 192 GWYTCEAKNSAGETTKPPVFTVAPPSEIK 220
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 FSQNPICFFRTISVRSGYLINPFKF--HFA*NCVFDGLLFVNPVCLLRTIHSGTGTAAVG 273
FS +P F R+ S S Y+ +PF F A +CV LF L+ +HS TA +G
Sbjct: 51 FSISPHPFIRSNS--SKYIYSPFIFCHRTANSCVAVCSLFTCLHSLVLLLHSSKTTAFLG 108
Query: 274 GFSSRLG 294
F + G
Sbjct: 109 VFVRKFG 115
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 FSQNPICFFRTISVRSGYLINPFKF--HFA*NCVFDGLLFVNPVCLLRTIHSGTGTAAVG 273
FS +P F R+ S S Y+ +PF F A +CV LF L+ +HS TA +G
Sbjct: 51 FSISPHPFIRSNS--SKYIYSPFIFCHRTANSCVAVCSLFTCLHSLVLLLHSSKTTAFLG 108
Query: 274 GFSSRLG 294
F + G
Sbjct: 109 VFVRKFG 115
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/86 (30%), Positives = 34/86 (39%)
Frame = +1
Query: 247 SGTGTAAVGGFSSRLGAIVKAGGRFVNAAAALSVVYVPGPGINPLASENFPRPVILKAGA 426
+G G A G GAI + G + A AL + G G+ ASE P +L+ A
Sbjct: 46 AGAGAAGAGAAGQAGGAIAQIGQLYQLAQGALQLTGT-GVGVLNQASEGNWFPAVLEQTA 104
Query: 427 ALLLPSFASPSTGGIE*VLGALAVIP 504
GG+ LGAL P
Sbjct: 105 KNSQALMKQGGGGGLN--LGALGPAP 128
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Frame = -1
Query: 470 MPP----VLGEAKEGSKRAAPA----FSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKR 315
MPP +L +A S R AP S+ K +E K G Y+ +T
Sbjct: 1022 MPPPPEEILNKAMISSSRPAPPPPPPKSLAAAVKVAEMKAAAAGKIYYSGSSRTGKITDS 1081
Query: 314 PPAFTMAPRRELKPPTAAVPVPE 246
PP +P+ +VP P+
Sbjct: 1082 PPFIDDSPKNSSASDAPSVPSPQ 1104
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 327 IDEASTCLHDGS*TRTKTTHCSGSR 253
+D + TC DGS T + TT C G++
Sbjct: 1434 LDYSFTCFDDGSSTPSPTTRCPGTQ 1458
>U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical
protein T19D12.2b protein.
Length = 422
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 327 IDEASTCLHDGS*TRTKTTHCSGSR 253
+D + TC DGS T + TT C G++
Sbjct: 381 LDYSFTCFDDGSSTPSPTTRCPGTQ 405
>U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical
protein T19D12.2c protein.
Length = 516
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 327 IDEASTCLHDGS*TRTKTTHCSGSR 253
+D + TC DGS T + TT C G++
Sbjct: 381 LDYSFTCFDDGSSTPSPTTRCPGTQ 405
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 327 IDEASTCLHDGS*TRTKTTHCSGSR 253
+D + TC DGS T + TT C G++
Sbjct: 381 LDYSFTCFDDGSSTPSPTTRCPGTQ 405
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 237 PEKTNGVYK-EKSIKYTVSSKMKLERVDQIPAPNAYCPEKADRILREKSPAFSFRTKSEI 61
PEK + + E+S K + + K + + +IP + PEK I EKSP S + EI
Sbjct: 925 PEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEI--EKSPKKS-EKRQEI 981
Query: 60 TKV 52
++
Sbjct: 982 QEI 984
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 237 PEKTNGVYK-EKSIKYTVSSKMKLERVDQIPAPNAYCPEKADRILREKSPAFSFRTKSEI 61
PEK + + E+S K + + K + + +IP + PEK I EKSP S + EI
Sbjct: 923 PEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEI--EKSPKKS-EKRQEI 979
Query: 60 TKV 52
++
Sbjct: 980 QEI 982
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,117,847
Number of Sequences: 27780
Number of extensions: 406129
Number of successful extensions: 1042
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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