Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0368.Seq
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 167 6e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 167 6e-42
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 166 1e-41
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 166 1e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 166 1e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 163 1e-40
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 163 1e-40
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 160 9e-40
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 160 9e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 96 2e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 96 2e-20
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 96 2e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 91 5e-19
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 91 5e-19
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 91 5e-19
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 91 5e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 75 4e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 6e-14
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 34 0.100
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 34 0.100
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 32 0.40
At5g48340.1 68418.m05973 expressed protein 31 0.70
At1g64830.1 68414.m07350 aspartyl protease family protein contai... 30 1.2
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 29 2.1
At2g31920.1 68415.m03899 expressed protein 29 2.1
At4g30040.1 68417.m04274 aspartyl protease family contains Pfam ... 29 3.8
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 5.0
At1g26890.1 68414.m03279 hypothetical protein 28 6.6
At1g26670.1 68414.m03249 vesical transport v-SNARE 12 (VTI12) / ... 28 6.6
At4g19490.2 68417.m02867 expressed protein 27 8.7
At4g19490.1 68417.m02866 expressed protein 27 8.7
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 27 8.7
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 27 8.7
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 167 bits (406), Expect = 6e-42
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QYRALTVP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVP 287
Score = 155 bits (377), Expect = 2e-38
Identities = 70/91 (76%), Positives = 78/91 (85%)
Frame = +1
Query: 229 QTVPCLDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 408
Q L ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNS
Sbjct: 279 QQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338
Query: 409 SYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 501
SYFVEWIPNNVK+ VCDIPP GLKMA+TFIG
Sbjct: 339 SYFVEWIPNNVKSTVCDIPPTGLKMASTFIG 369
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 167 bits (406), Expect = 6e-42
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QYRALTVP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVP 287
Score = 152 bits (368), Expect = 2e-37
Identities = 68/91 (74%), Positives = 78/91 (85%)
Frame = +1
Query: 229 QTVPCLDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 408
Q L ELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNS
Sbjct: 279 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338
Query: 409 SYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 501
SYFVEWIPNNVK++VCDI PRGL MA+TFIG
Sbjct: 339 SYFVEWIPNNVKSSVCDIAPRGLSMASTFIG 369
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 166 bits (403), Expect = 1e-41
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QYR+LTVP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 155 bits (375), Expect = 3e-38
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L ELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVE
Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 424 WIPNNVKTAVCDIPPRGLKMAATFIG 501
WIPNNVK+ VCDIPP GLKMA+TFIG
Sbjct: 344 WIPNNVKSTVCDIPPTGLKMASTFIG 369
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 166 bits (403), Expect = 1e-41
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QYR+LTVP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 155 bits (375), Expect = 3e-38
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L ELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVE
Sbjct: 284 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 424 WIPNNVKTAVCDIPPRGLKMAATFIG 501
WIPNNVK+ VCDIPP GLKMA+TFIG
Sbjct: 344 WIPNNVKSTVCDIPPTGLKMASTFIG 369
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (403), Expect = 1e-41
Identities = 74/85 (87%), Positives = 81/85 (95%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QYR LTVP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRNLTVP 287
Score = 156 bits (378), Expect = 1e-38
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVE
Sbjct: 284 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343
Query: 424 WIPNNVKTAVCDIPPRGLKMAATFIG 501
WIPNNVK+ VCDIPP GLKMA+TFIG
Sbjct: 344 WIPNNVKSTVCDIPPTGLKMASTFIG 369
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 163 bits (395), Expect = 1e-40
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QY AL+VP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYSALSVP 287
Score = 155 bits (375), Expect = 3e-38
Identities = 69/91 (75%), Positives = 79/91 (86%)
Frame = +1
Query: 229 QTVPCLDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 408
Q L ELTQQM+DAKNMM A DPRHGRYLT +A+FRG++S KEVDEQM+NIQNKNS
Sbjct: 279 QQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNS 338
Query: 409 SYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 501
SYFVEWIPNNVK++VCDI P+GLKMA+TFIG
Sbjct: 339 SYFVEWIPNNVKSSVCDIAPKGLKMASTFIG 369
Score = 113 bits (273), Expect = 8e-26
Identities = 49/55 (89%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQD 427
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 163 bits (395), Expect = 1e-40
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPR
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QY AL+VP
Sbjct: 263 LHFFMVGFAPLTSRGSQQYSALSVP 287
Score = 154 bits (374), Expect = 4e-38
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 229 QTVPCLDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 408
Q L ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNS
Sbjct: 279 QQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNS 338
Query: 409 SYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 501
SYFVEWIPNNVK++VCDI P GLKMA+TFIG
Sbjct: 339 SYFVEWIPNNVKSSVCDIAPTGLKMASTFIG 369
Score = 113 bits (273), Expect = 8e-26
Identities = 49/55 (89%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQD 427
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 160 bits (388), Expect = 9e-40
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPR
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPR 263
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QY +LTVP
Sbjct: 264 LHFFMVGFAPLTSRGSQQYISLTVP 288
Score = 153 bits (372), Expect = 8e-38
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQ+LN+QNKNSSYFVE
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344
Query: 424 WIPNNVKTAVCDIPPRGLKMAATFIG 501
WIPNNVK++VCDIPP G+KMA+TF+G
Sbjct: 345 WIPNNVKSSVCDIPPTGIKMASTFVG 370
Score = 115 bits (276), Expect = 3e-26
Identities = 50/55 (90%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+
Sbjct: 374 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 428
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 160 bits (388), Expect = 9e-40
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+DLRKLAVN++PFPR
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPR 263
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
LHFFM GFAPLTSRGS+QY +LTVP
Sbjct: 264 LHFFMVGFAPLTSRGSQQYISLTVP 288
Score = 157 bits (380), Expect = 8e-39
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L ELTQQM+D+KNMM A DPRHGRYLT +AIFRG+MS KEVDEQ+LNIQNKNSSYFVE
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344
Query: 424 WIPNNVKTAVCDIPPRGLKMAATFIG 501
WIPNNVK++VCDIPP+GLKMAATF+G
Sbjct: 345 WIPNNVKSSVCDIPPKGLKMAATFVG 370
Score = 113 bits (273), Expect = 8e-26
Identities = 49/55 (89%), Positives = 55/55 (100%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 674
+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ+
Sbjct: 374 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQD 428
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+VP N P
Sbjct: 265 IHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
A+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+VP N P
Sbjct: 265 IHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
A+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN L+S T+S +TT LRF G +N D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVP 256
+HF + +AP+ S + +VP
Sbjct: 265 IHFMLSSYAPVISSAKAYHEQFSVP 289
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +1
Query: 256 ELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPN 435
E+T +F+ NMMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 290 EITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPT 349
Query: 436 NVKTAVCDIPP 468
K + PP
Sbjct: 350 GFKCGINYQPP 360
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
A+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 AVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+V N P
Sbjct: 265 IHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+V N P
Sbjct: 265 IHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+V N P
Sbjct: 265 IHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 264
Query: 182 LHFFMPGFAPLTSRGSRQYRALTVPSSRNRCSTP 283
+HF + +AP+ S + L+V N P
Sbjct: 265 IHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 298
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 244 LDCTELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 423
L E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 424 WIPNNVKTAVCDIPP 468
W P K + PP
Sbjct: 346 WCPTGFKCGINYQPP 360
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 510 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 665
++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DN AL I L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR
Sbjct: 206 DNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPR 265
Query: 182 LHFFMPGFAPLT-SRGSRQYRALTV 253
HF M G+ PLT R + R TV
Sbjct: 266 CHFLMTGYTPLTVERQANVIRKTTV 290
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPR 181
DN AL I L L+ PT+ N LVS MS TT LR+PG +N DL L +++P PR
Sbjct: 206 DNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPR 265
Query: 182 LHFFMPGFAPLT-SRGSRQYRALTV 253
HF M G+ PLT R + R TV
Sbjct: 266 CHFLMTGYTPLTVERQANVIRKTTV 290
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/76 (21%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +1
Query: 256 ELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFV 420
++ +++ KN+M + R+ +Y+++ I +G + +V E + I+ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 421 EWIPNNVKTAVCDIPP 468
EW P +++ A+ P
Sbjct: 352 EWGPASIQVALSKKSP 367
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 33.9 bits (74), Expect = 0.100
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 20 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLRKLAVNMVPFPRLH 187
DIC+ S PT +L LVSL + G + RFP N DL + + VP+ +
Sbjct: 840 DICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIEN 899
Query: 188 FFMPGFAPLTSRGSRQYRALTV 253
FF LT +G R+ + +++
Sbjct: 900 FF--NLTKLTMKGCRELKCVSL 919
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 33.9 bits (74), Expect = 0.100
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 20 DICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPG-QLN---ADLRKLAVNMVPFPRLH 187
DIC+ S PT +L LVSL + G + RFP N DL + + VP+ +
Sbjct: 801 DICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIEN 860
Query: 188 FFMPGFAPLTSRGSRQYRALTV 253
FF LT +G R+ + +++
Sbjct: 861 FF--NLTKLTMKGCRELKCVSL 880
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 124 RSVER*SQKIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLD 249
+ VER QKI RK S LL + R P W ++ P L+
Sbjct: 588 QEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPILE 629
>At5g48340.1 68418.m05973 expressed protein
Length = 510
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 551 GELFRDALEQLLDGVEFPMKVAAILRPRGGMSHTAVFTLLGIHS 420
GEL ++ + ++ G+E + ILR M H V LLG+ S
Sbjct: 333 GELLKETMAEICRGLENESSFSVILRELSKMKHIQVIKLLGLLS 376
>At1g64830.1 68414.m07350 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 431
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 175 PASPLLHARFRSPHIPWKQTVPCLDCTELTQQMFDAK 285
P P+L + W Q PC DC + T +FD K
Sbjct: 95 PPVPILAIADTGSDLIWTQCNPCEDCYQQTSPLFDPK 131
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 EALYDICFRT-LKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 184
+A+ ICF +L P YG ++H+VSL V+ +L+ LA +P P+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS----LQTELSYLQAHLATLELPQPQ- 127
Query: 185 HFFMPGFAPLTSRGSRQYRALT 250
P P++S GS Q ++T
Sbjct: 128 ----PPQVPVSSSGSLQALSIT 145
>At2g31920.1 68415.m03899 expressed protein
Length = 585
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 166 GSLPASPLLHARFRSPHIPWKQTVPCLDCTELTQQMFDAKNMMAACDPRHGRYLTVA 336
G+ P+SP L + RSP + + VPCL + + F K D H Y+ V+
Sbjct: 18 GNSPSSPPLLSSHRSPLLQVIEIVPCLSDDQWRSEAFFVK----VSDSLHAAYVAVS 70
>At4g30040.1 68417.m04274 aspartyl protease family contains Pfam
domain, PF00026: eukaryotic aspartyl protease
Length = 427
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 166 GSLPASPLLHARFRSPHIPWKQTVPCLDCTELTQQMFD 279
GS P + LLH S + W Q +PC++C + +FD
Sbjct: 92 GSPPITQLLHMDTASDLL-WIQCLPCINCYAQSLPIFD 128
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 386 LTSKTRTPHTSWNGSPTT*R-PPCATFPLVVSRWPPPSSETP 508
+TS T P + PTT PP T P V + PP S TP
Sbjct: 32 VTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTP 73
>At1g26890.1 68414.m03279 hypothetical protein
Length = 280
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 35 TLKLSTPTYGDLNHLVSLTMSG-VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 190
TL L Y D LVSL S V CL+ + +L K V + +LH+
Sbjct: 110 TLSLRFVVYKDEESLVSLLSSSPVLNCLKVDRHKDDNLTKFTVKVSTLKQLHY 162
>At1g26670.1 68414.m03249 vesical transport v-SNARE 12 (VTI12) /
vesicle soluble NSF attachment protein receptor VTI1b
(VTI1B) receptor VTI1b identical to SP|Q9SEL5 Vesicle
transport v-SNARE 12 (AtVTI12) (Vesicle transport
v-SNARE protein VTI1b) (Vesicle soluble NSF attachment
protein receptor VTI1b) (AtVTI1b) {Arabidopsis thaliana}
Length = 222
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 489 HLHRKLHAIQELFKRISEQFTAMFRRKAFLHW 584
H H KLH + + + + TAM RR W
Sbjct: 168 HAHNKLHGVDDAIDKSKKVLTAMSRRMTRNKW 199
>At4g19490.2 68417.m02867 expressed protein
Length = 1054
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = +1
Query: 142 SQKIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTELTQQM------FDAKNMMAAC 303
+Q+IG + GSL +SPL A ++P + K + +++ + + + AAC
Sbjct: 535 AQEIGFQGGSLVSSPLGKATSKAPPLQGKSS-DASSLMNMSRNFRADVLRENTEAVFAAC 593
Query: 304 DPRHGRY---LTVAAIFRGRMSMKE 369
+ HGR+ L V A+ ++ ++E
Sbjct: 594 EVTHGRWAKLLGVRALLHPKLKLQE 618
>At4g19490.1 68417.m02866 expressed protein
Length = 1054
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = +1
Query: 142 SQKIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTELTQQM------FDAKNMMAAC 303
+Q+IG + GSL +SPL A ++P + K + +++ + + + AAC
Sbjct: 535 AQEIGFQGGSLVSSPLGKATSKAPPLQGKSS-DASSLMNMSRNFRADVLRENTEAVFAAC 593
Query: 304 DPRHGRY---LTVAAIFRGRMSMKE 369
+ HGR+ L V A+ ++ ++E
Sbjct: 594 EVTHGRWAKLLGVRALLHPKLKLQE 618
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 262 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 414
T +D+K + C+ R L V A RG + DE+++N+ NKNS +
Sbjct: 910 TNPYYDSKVVGKYCEKRDPT-LAVVAYRRG-----QCDEELINVTNKNSLF 954
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 262 TQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 414
T +D+K + C+ R L V A RG + DE+++N+ NKNS +
Sbjct: 910 TNPYYDSKVVGKYCEKRDPT-LAVVAYRRG-----QCDEELINVTNKNSLF 954
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,813,178
Number of Sequences: 28952
Number of extensions: 338043
Number of successful extensions: 1158
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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