Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0367.Seq
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    27   0.20 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.80 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.80 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.9  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 453 GGPAARGCAHPSAHSGTRLGCSTICTSYS 367
           G PA  G A P   S   LG + IC+ YS
Sbjct: 264 GAPATTGIAGPFTQSPGVLGFNEICSFYS 292


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 643 FAFRAWKSLYSSTSGF 596
           F F++WK LY+S + F
Sbjct: 55  FTFKSWKVLYTSLTSF 70


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 377 VQIVLHPNLVPEWADGCAHPR 439
           +Q V HP    +W DG  H R
Sbjct: 71  IQSVPHPETEKDWGDGDKHDR 91


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 8   PPPPTLHAPHSTHHRPVP--GAKAAG 79
           PPPP ++  H   + P P  G   AG
Sbjct: 163 PPPPPVYTHHYARYHPYPNFGVPPAG 188


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +1

Query: 382 DRAAPQPGPR-VGGRVCAPPRRRAPTPHVGDELIPVVDFHPVLNTWMT*GAP 534
           +RA+P P  R     +  PP    P  H+  +  P     P  +TW T   P
Sbjct: 263 NRASPYPMQRPKSASLSPPPHVYNPPDHI-QQATPYSAPGPTYSTWSTVQTP 313


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 464 WGTSSYRSW 490
           WGT+ Y +W
Sbjct: 494 WGTTEYHNW 502


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 478 IPVVDFHPVLNTWMT 522
           +P   F PV+++W T
Sbjct: 279 LPFAQFGPVIDSWAT 293


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 478 IPVVDFHPVLNTWMT 522
           +P   F PV+++W T
Sbjct: 279 LPFAQFGPVIDSWAT 293


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 478 IPVVDFHPVLNTWMT 522
           +P   F PV+++W T
Sbjct: 279 LPFAQFGPVIDSWAT 293


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 478 IPVVDFHPVLNTWMT 522
           +P   F PV+++W T
Sbjct: 279 LPFAQFGPVIDSWAT 293


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 478 IPVVDFHPVLNTWMT 522
           +P   F PV+++W T
Sbjct: 279 LPFAQFGPVIDSWAT 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,312
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)