Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0367.Seq
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0610 + 4478521-4478715,4480003-4480090,4480255-4480321,448... 34 0.097
10_01_0074 + 977173-977309,978271-978351,978444-978459 33 0.30
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 32 0.39
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 32 0.52
08_01_0316 + 2802057-2802474,2802575-2802712,2802803-2802891,280... 31 0.68
04_04_1404 + 33302080-33303341,33303435-33305307 31 0.90
01_01_1063 - 8386813-8387236,8387322-8387779 31 0.90
12_01_0427 + 3359766-3360092,3360425-3360541,3360738-3360893,336... 31 1.2
06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806 30 1.6
04_04_1487 - 33919654-33920399,33920676-33920817 30 2.1
11_08_0072 + 28154168-28154680 29 2.8
11_01_0325 + 2431001-2431429 29 2.8
08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254... 29 2.8
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 29 2.8
04_04_0217 - 23693124-23693535,23693965-23694052,23694428-236945... 29 2.8
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 29 2.8
01_06_1506 + 37830468-37830600,37830703-37830920,37832078-378325... 29 2.8
06_03_1310 + 29238644-29240260 29 4.8
06_02_0216 + 13157377-13157583,13159271-13159339,13160727-131608... 28 6.4
01_06_0258 + 27950196-27950749,27953670-27954570 28 6.4
12_02_0283 + 16784063-16784152,16785084-16785281 28 8.4
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 28 8.4
07_03_1021 - 23347426-23347619,23348040-23348145,23348257-23348268 28 8.4
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 8.4
07_01_0375 - 2790287-2790675,2790843-2793783 28 8.4
05_04_0132 + 18303925-18307164 28 8.4
04_04_1235 - 31972497-31972640,31972783-31972883,31973013-31973070 28 8.4
04_03_0991 - 21500143-21500799,21500834-21501172 28 8.4
01_06_1408 - 37088014-37088448,37088892-37089167,37090777-37092297 28 8.4
01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557... 28 8.4
>03_01_0610 +
4478521-4478715,4480003-4480090,4480255-4480321,
4480561-4480679,4480809-4480904,4481019-4481074,
4481400-4481485,4481914-4482048,4482216-4482300
Length = 308
Score = 34.3 bits (75), Expect = 0.097
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = -3
Query: 638 VQSLEIFVLVDVGLPQDSDNLAAVQVVEEHSEVTVGAPQVIQVLSTGWKS 489
VQSLE+ ++ V P D+D L+AV E+ +T+ +P+ V GWK+
Sbjct: 70 VQSLELPLIKHVEGP-DTDRLSAVLRDEKFDWITITSPEAAAVFLEGWKA 118
>10_01_0074 + 977173-977309,978271-978351,978444-978459
Length = 77
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = +2
Query: 578 GYRCLVEARRRRVQRFPGSERERFNTGDSGRR 673
G RC ARRRR +R SE E F GD GRR
Sbjct: 17 GGRCCGSARRRRKRR---SEAEAFGDGDGGRR 45
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 476 SSSPTCGVGARRRGGAHTRPPTRGPGWGAARSARRTPTDSVRT 348
SS P G R++GG T PP+ G GAAR++ R P + T
Sbjct: 322 SSRPADARGKRKQGG--TPPPSPPRGGGAARASNRRPEGAAPT 362
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 506 STGWKSTTGMSSSPTCGVGARRRGGAHTRPPTRGPGWGAARSARRTPTDSVR 351
S GW +TTG SS G + RGG PP PG S R T + R
Sbjct: 370 SIGWTTTTGAISSMRLKQGHKYRGGMIFVPPIARPGANVPTS-RSPATQATR 420
>08_01_0316 +
2802057-2802474,2802575-2802712,2802803-2802891,
2803711-2803980,2804063-2804193,2804364-2804481,
2804561-2804650,2804731-2804799,2804846-2804854,
2804903-2804980,2805249-2805303,2805810-2806003
Length = 552
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 APHSTHHRPVPGAKAAGCNR-LDERGLRAGLQ**SDP*TDNRVGAGGSRRPARSERVHSD 205
AP S+ P P A AAG R R R+ L SD RV +G S +P + + +
Sbjct: 23 APKSSETSPAPAAAAAGSGRWTRSRSARSHLGLDSDSTDHPRVVSGSSDQPPKKRKKTTT 82
Query: 206 GTGARGGT 229
A G+
Sbjct: 83 AVAAAAGS 90
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 476 SSSPTCGVGARRRGGAHTRPPTRGPGWGAARSARRTPTDSVRT 348
SS P G R+ GG T PP+ G GAAR++ R P + T
Sbjct: 342 SSRPADAQGKRKLGG--TPPPSPPRGGGAARASSRRPEGAAPT 382
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 5 VPPPPTLHAPHSTHHRPVPGAKAA 76
+PPPP + PH H+P P A AA
Sbjct: 239 MPPPPMPYGPHPHPHQPPPPAAAA 262
>12_01_0427 +
3359766-3360092,3360425-3360541,3360738-3360893,
3361009-3361144,3361303-3361436,3361832-3361987,
3362496-3362594,3362817-3362932,3363358-3363532,
3363807-3363885,3363989-3364132,3364206-3364319,
3364415-3364536,3364929-3365011,3365091-3365188,
3365300-3365420,3366237-3366333,3366782-3366874,
3366948-3367053,3367395-3367540,3367617-3367697,
3367838-3367921,3367997-3368132,3368334-3368400,
3368943-3369102
Length = 1048
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 60 RVLRLLAATDWTSEVFVLDFNDDLTREQITELEQAAR 170
R LRLL++ DWT ++D N+D + E+ R
Sbjct: 726 RFLRLLSSFDWTFSPMIIDINNDFNLKDEKEINVLKR 762
>06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806
Length = 331
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 198 CTRSDRAGRREPPAPTLLSVHGSDHH 121
C+R+ A RR PP P L V GS HH
Sbjct: 33 CSRTATAQRRLPPGPWQLPVIGSLHH 58
>04_04_1487 - 33919654-33920399,33920676-33920817
Length = 295
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 518 IQVLSTGWKSTTGMSSSPTCGVGA--RRRGGAHTRPPTRGPGWG-AARSARR 372
+ V+ W+ T P+ G+ RRR G T P R GWG AR RR
Sbjct: 230 VLVIGVEWRKTKVGDEEPSRGLAMLRRRRQGECTPSPPRRGGWGWFARVLRR 281
>11_08_0072 + 28154168-28154680
Length = 170
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 TDNRVGAGG--SRRPARSERVHSDGTGARGGT 229
+D R+G GG SR PAR R G GA GT
Sbjct: 63 SDRRLGGGGGVSRVPARLPRQRPGGAGAGNGT 94
>11_01_0325 + 2431001-2431429
Length = 142
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 491 STTGMSSSPTCGVGARRRGGAHTRPPTRGPGWGAARSARRTPTDSVRTWEA 339
+T SSS + + A R GG+ + G G G R RR S R W A
Sbjct: 78 TTAASSSSASTFLPAVRYGGSRSMLLFNGRGGGGRRLVRRGSNSSARFWLA 128
>08_02_0490 -
17724878-17725045,17725264-17725342,17725434-17725498,
17725569-17725657,17725750-17725858,17725969-17726047,
17727247-17727512
Length = 284
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 8 PPPPTLHAPHSTHHRPVPGAKAAGCNRLD 94
PPPP A S +P P KAAG + L+
Sbjct: 4 PPPPAAAAAASPKRKPKPKPKAAGASTLN 32
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 283 GQRLRPAERRCGGPGLHASPTSRSCAVTMHTLRPRGSAR 167
G R P RR GG + ASP S+S A T + RGS R
Sbjct: 17 GSRSSPVRRRDGG--VAASPGSQSAASTERRKKNRGSKR 53
>04_04_0217 -
23693124-23693535,23693965-23694052,23694428-23694503,
23694729-23694787,23694853-23694934,23695533-23696577,
23696700-23696998
Length = 686
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 298 GEGARGQRLRPAERRCGGPGLHASPTSRSCAVTMHTLRPRG 176
G AR QR R A R CG H + + R LRP G
Sbjct: 292 GAAARAQRRRAAARLCGREQPHGAASPRLPGCRRDALRPGG 332
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 8 PPPPTLHAPHSTHHRPV-PGAKAAG 79
PPPP H + HH V PGA AAG
Sbjct: 128 PPPPPPHPHAAPHHMHVMPGAAAAG 152
>01_06_1506 +
37830468-37830600,37830703-37830920,37832078-37832529,
37832595-37833402,37834986-37835073,37835196-37835299,
37835402-37835483,37836670-37836923
Length = 712
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 578 LAAVQVVEEHSEVTVGAP-QVIQVLSTGWKSTTGMSSSPT 462
++ + VV+EH ++ +G P V V GW S TG ++SP+
Sbjct: 562 ISQIFVVKEH-QMEIGYPTDVKHVTHIGWDSPTGSAASPS 600
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 8 PPPPTLHAPHSTHHRPVPGAKAA 76
PPPPT P HH PVPG ++
Sbjct: 459 PPPPTTTPPG--HHAPVPGTPSS 479
>06_02_0216 +
13157377-13157583,13159271-13159339,13160727-13160851,
13160959-13161190
Length = 210
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 161 GGSRRPARSERVHSDGTGARGGTRVQ 238
GG+R A ++RV +G G RGG R+Q
Sbjct: 152 GGARAGATADRVRGEGAG-RGGRRLQ 176
>01_06_0258 + 27950196-27950749,27953670-27954570
Length = 484
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 440 AAGPPRRTWGTSSYRSWTSIPCS 508
A PRRT+ R+W IPCS
Sbjct: 136 APASPRRTFRPDKSRTWAPIPCS 158
>12_02_0283 + 16784063-16784152,16785084-16785281
Length = 95
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 379 ADRAAPQPGPRVGGRVCAPPRRRAPTPHVGDELIPVVDFHPV 504
+DR AP PGPR+ R P + + + GD P D PV
Sbjct: 34 SDRDAPTPGPRLVDRSDLSPPKNSSS---GDRDTPTFDPRPV 72
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 2 RVPPPPTLHAPHSTHHRPVP 61
R PPPPT AP RP+P
Sbjct: 81 REPPPPTSPAPPQCPSRPIP 100
>07_03_1021 - 23347426-23347619,23348040-23348145,23348257-23348268
Length = 103
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 334 VIEFIEQAVLEVGEGARGQRLRPAERRCGGPGLHASPTSRSCAVTMHTLRPRGSAR 167
V++ + Q +GE A A R G L ++ +C + HT RPR S R
Sbjct: 33 VLDLLLQGKNRIGESAGETAPTRALLRFGPKRLSGHRSAAACGPSGHTARPRPSTR 88
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 219 RAPVPSLCTRSDRAGRREPPAPTLLSVHGSDHH 121
R PV S T + + + PP P+ L + GS HH
Sbjct: 19 RLPVISCATNTKPSRLKLPPGPSTLPLIGSIHH 51
>07_01_0375 - 2790287-2790675,2790843-2793783
Length = 1109
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 253 CGGPGLHASPTSRSCAVTMHTLRPRGSARAA 161
CG PG+ S AVT+H L G AA
Sbjct: 64 CGWPGIACSAAMEVTAVTLHGLNLHGELSAA 94
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 458 GVGARRRGGAHTRP-PTRGPGWGA 390
GV A R+G AH RP T G G GA
Sbjct: 185 GVSAFRKGAAHQRPEDTNGAGGGA 208
>04_04_1235 - 31972497-31972640,31972783-31972883,31973013-31973070
Length = 100
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 578 LAAVQVVEEHSEVTVGAP-QVIQVLSTGWKSTTGMSSSPTCG 456
++ + VV+EH E+ +G+P V V GW TG ++SP+ G
Sbjct: 15 ISQIFVVKEH-EMQIGSPTDVKHVAHIGWDGLTG-NASPSWG 54
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 8 PPPPTLHAPHSTHHRPVPGAKAAG 79
PPPPT+ P S HR + G A G
Sbjct: 150 PPPPTVVVPPSDLHRHLGGLLATG 173
>01_06_1408 - 37088014-37088448,37088892-37089167,37090777-37092297
Length = 743
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +2
Query: 347 MFVPSLXEYDVQIVLHPNLVPEWADGCAHPRAAGPPRRTWGTSSYRSW 490
+ V + +D++ + + P++A G A G P TW + +W
Sbjct: 472 VIVAVVRSFDIEAIARSSRRPKFAPGLTATFAGGLPPTTWDAEASAAW 519
>01_05_0105 -
18155135-18155297,18155379-18155515,18155621-18155734,
18155768-18155806,18156838-18156993
Length = 202
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 388 AAPQPGPRVGGRVCAPPRRRAPTPH-VGDELIPVV 489
A P VGG A RR P PH G+E+ P +
Sbjct: 23 ATTSPPGSVGGESAARHRRALPRPHGEGEEIFPCI 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,860,154
Number of Sequences: 37544
Number of extensions: 465208
Number of successful extensions: 2927
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2911
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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