Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0364.Seq
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011550-1|AAS15686.1|  186|Drosophila melanogaster GH27387p pro...    29   9.4  
AE014297-3712|AAF56394.1|  328|Drosophila melanogaster CG9996-PA...    29   9.4  

>BT011550-1|AAS15686.1|  186|Drosophila melanogaster GH27387p
           protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 231 DLMSLGASLKRGNKGIKRFKRINKYK-IGAIFERPGLANSALYNTKTLKDLHLKASIPAL 55
           ++   G  +  GN+G     R   +K I    E   L ++A  NT+ L  LH   SIP++
Sbjct: 102 NMSQTGVKVIHGNRGYFHSDRQPLFKSIYGAMENYQLGSNA--NTEFLMPLHAALSIPSI 159

Query: 54  LTETTGVIRNVPTYMSN 4
              + G I N    ++N
Sbjct: 160 KNSSCGKISNEVLKVAN 176


>AE014297-3712|AAF56394.1|  328|Drosophila melanogaster CG9996-PA
           protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 231 DLMSLGASLKRGNKGIKRFKRINKYK-IGAIFERPGLANSALYNTKTLKDLHLKASIPAL 55
           ++   G  +  GN+G     R   +K I    E   L ++A  NT+ L  LH   SIP++
Sbjct: 244 NMSQTGVKVIHGNRGYFHSDRQPLFKSIYGAMENYQLGSNA--NTEFLMPLHAALSIPSI 301

Query: 54  LTETTGVIRNVPTYMSN 4
              + G I N    ++N
Sbjct: 302 KNSSCGKISNEVLKVAN 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,329,883
Number of Sequences: 53049
Number of extensions: 641783
Number of successful extensions: 1260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)