Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0363.Seq
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   6.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.4  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 675 LIQVFGNGLHVVECSK 628
           L Q++GN LH+ + SK
Sbjct: 6   LAQLYGNELHIKQISK 21


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 675 LIQVFGNGLHVVECSK 628
           L Q++GN LH+ + SK
Sbjct: 6   LAQLYGNELHIKQISK 21


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 608 VLL*IVFFEHSTTCSPF 658
           ++L IVFFE  +  SPF
Sbjct: 50  IILTIVFFEKRSALSPF 66


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 675 LIQVFGNGLHVVECSK 628
           L Q++GN LH+ + SK
Sbjct: 6   LAQLYGNELHIKQISK 21


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 656 FPKTCISPQSAALLHLYWWKDLL*VPAG 739
           FP   IS   A ++   W K  L +P G
Sbjct: 217 FPALIISACYAVIVRTIWSKSKLLIPVG 244


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 513 KRFSLSYRKVIGPYLLING 569
           +R S S R  IG Y+ +NG
Sbjct: 452 RRLSNSERNQIGQYVTVNG 470


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 716 PSTSKGAVAPLIVD*YKFLGTDYTLLSVQRKLFIITQRCVKDPRSP 579
           P T K  ++PL V     LGT    L+     FI+TQ       SP
Sbjct: 21  PMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSP 66


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 716 PSTSKGAVAPLIVD*YKFLGTDYTLLSVQRKLFIITQRCVKDPRSP 579
           P T K  ++PL V     LGT    L+     FI+TQ       SP
Sbjct: 21  PMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTFSGVTSP 66


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 144 EITKKKKNNTLSLFVYLNLILAT-ITVFEKFG 236
           ++TK    NTL   VY++L+L    T F K G
Sbjct: 280 KMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTG 311


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 666 LVLVHNQRRYCT 701
           ++L +NQ +YCT
Sbjct: 238 IILTNNQAKYCT 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,556
Number of Sequences: 336
Number of extensions: 3888
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)