Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0362.Seq
(784 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 27 0.22
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 0.30
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 2.1
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 23 3.6
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 3.6
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 23 3.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 6.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 6.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 6.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 6.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 6.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 6.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 6.4
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 8.4
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 8.4
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 8.4
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 8.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 8.4
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 74 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 169
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 26.2 bits (55), Expect = 0.30
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 262 PSGKSFVTSRRSCATSLLTSSR---KWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRL 432
PSG+S ++ R + + T S PP PAA + +L T + +VA
Sbjct: 99 PSGESMLSERAALLRGVPTLSPVGVALPPTLPAAAAAALLPPQTAAMAAYLNAAAVAAAA 158
Query: 433 SSNPRSWVWKLAASTRPHITPS*SASGHP*GL 528
+ R + + R ++P S+S P G+
Sbjct: 159 QQSHRLMMTSPSGFNRASVSPLISSSSSPPGV 190
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
+ + +S P S T + P ++CW +++ +P P + + PTPS
Sbjct: 292 QQATPYSAPGPTYSTWSTVQTPTTVMSPTINCW---SLTSSPPPPYQISAQPTPS 343
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 679 STDPYGVLPLWRSNDLN 629
+ DPYG++ W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 646 SREEVLRMDRWIDPRLPL*PSNRCGSRNRSTTSLAPPL 759
+REE+ + + + R+ + SNR + TS A PL
Sbjct: 249 TREELAQRTKLTEARIQVWFSNRRARLRKQITSAATPL 286
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -2
Query: 285 CHERFPARRWCERVAALGEDLHEV 214
CH+ F + WC A H V
Sbjct: 138 CHQGFSSSTWCNYSAYSSASRHHV 161
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 83 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 135 HRAHLRRIRTPPRHPASGLSRSRP 206
H+A +R + PP+ RS P
Sbjct: 62 HKAPIRPVALPPKREIPSPKRSSP 85
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 514 VHSHFMMELYVV 479
+HS+FM+ YVV
Sbjct: 26 IHSYFMVAFYVV 37
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 514 VHSHFMMELYVV 479
+HS+FM+ YVV
Sbjct: 26 IHSYFMVAFYVV 37
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 219 HEDPHRARLLVHTTAEREIVRDIKEKLC 302
H +PHR ++ + + + DI K+C
Sbjct: 14 HLEPHRMQIKPQSPSSSSRILDIPCKVC 41
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 219 HEDPHRARLLVHTTAEREIVRDIKEKLC 302
H +PHR ++ + + + DI K+C
Sbjct: 14 HLEPHRMQIKPQSPSSSSRILDIPCKVC 41
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,611
Number of Sequences: 336
Number of extensions: 5290
Number of successful extensions: 29
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -