Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0362.Seq
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 163 3e-41
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 105 7e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 97 3e-21
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 78 2e-15
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 55 1e-08
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 51 2e-07
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 50 3e-07
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 49 7e-07
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 49 7e-07
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.081
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.14
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.57
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 29 0.75
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 28 1.3
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.0
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 3.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.0
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 5.3
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 26 5.3
SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|ch... 26 7.0
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 26 7.0
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 7.0
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.3
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 9.3
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 25 9.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 9.3
SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces po... 25 9.3
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 25 9.3
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 163 bits (396), Expect = 3e-41
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKMTQI+F+TFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+
Sbjct: 117 EKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIM 176
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKIL ERGY+F+
Sbjct: 177 RLDLAGRDLTDYLMKILMERGYTFS 201
Score = 159 bits (385), Expect = 5e-40
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYELPDGQVITIGNERFR PEAL
Sbjct: 202 TTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEAL 261
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPS LG+E GIHE TYNSIMKC+
Sbjct: 262 FQPSALGLENAGIHEATYNSIMKCD 286
Score = 124 bits (298), Expect = 2e-29
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLY N V+SGGTTMYPGIADRMQKEI ALAPS+MK+KI+APPERKYSVWIGGSIL
Sbjct: 287 VDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSMKVKIVAPPERKYSVWIGGSIL 346
Query: 689 ASLS 700
ASLS
Sbjct: 347 ASLS 350
Score = 45.6 bits (103), Expect = 8e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 702 TFQQMWISKQEYDESGPSIV 761
TFQQMWISKQEYDESGP IV
Sbjct: 351 TFQQMWISKQEYDESGPGIV 370
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 105 bits (252), Expect = 7e-24
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKM + MF+ + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H +
Sbjct: 117 EKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVG 176
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
RLD+AGRD T YL+ +L +GY+F
Sbjct: 177 RLDVAGRDATRYLISLLLRKGYAF 200
Score = 85.8 bits (203), Expect = 6e-18
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +3
Query: 258 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 437
TA+ E VR++KEKLCYV+ D E + + ++ L ++Y LPDG+VI +G+ER+ CPE LF
Sbjct: 203 TADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLF 262
Query: 438 QPSFLGMEACGIHETTYNSIMKCE 509
QP +G E G+ E +++I +
Sbjct: 263 QPHLVGSEQPGLSEFIFDTIQAAD 286
Score = 55.2 bits (127), Expect = 1e-08
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------APSTM---KIKIIAPPER 655
VDIRK LY VLSGG++MY G+ R++KEI L P+ + K+KI P R
Sbjct: 287 VDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVLHGDPARLPNFKVKIEDAPRR 346
Query: 656 KYSVWIGGSILASL 697
+++V+IGG++LA +
Sbjct: 347 RHAVFIGGAVLADI 360
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 97.1 bits (231), Expect = 3e-21
Identities = 41/82 (50%), Positives = 63/82 (76%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EK+ + ++T N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI
Sbjct: 122 EKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQ 181
Query: 181 RLDLAGRDLTDYLMKILTERGY 246
+ ++ GRD+TDYL L + G+
Sbjct: 182 QEEIGGRDVTDYLQLQLRKSGH 203
Score = 86.2 bits (204), Expect = 5e-18
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
++AE+EIVR+IKEK CYVA DF E+ + +Y+LPD Q IT+G E F PE L
Sbjct: 207 SSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVL 266
Query: 435 FQPSFLGMEACGIHETTYNSIM 500
F P +G EA G+H + SI+
Sbjct: 267 FNPEMMGSEASGLHIQLFKSIL 288
Score = 70.9 bits (166), Expect = 2e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
+D+R LY+N VLSGG+T+ G +R E+ A++ ++KI A PER ++ W+GGSIL
Sbjct: 292 IDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPERMHNAWLGGSIL 351
Query: 689 ASLS 700
ASLS
Sbjct: 352 ASLS 355
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 77.8 bits (183), Expect = 2e-15
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEG 156
E +IMF++FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EG
Sbjct: 140 ENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEG 199
Query: 157 YALPHAILRLDLAGRDLTDYLMKILTER 240
Y + +I + LAGRD+T ++ +L +R
Sbjct: 200 YVIGSSIKTMPLAGRDVTYFVQSLLRDR 227
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST--------------MKIKIIAP 646
+D+RK LY N VLSGG+T++ +R+Q+++ + + + +I+
Sbjct: 320 IDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISH 379
Query: 647 PERKYSVWIGGSILA 691
++ +VW GGS+LA
Sbjct: 380 KRQRNAVWFGGSLLA 394
Score = 29.5 bits (63), Expect = 0.57
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 285 IKEKLCYVALDFEQEMATAASSSS--LEKSYELPDGQVITI--GNERFRCPEALFQP 443
IKE+ CYV D +E + L+ + E G TI G ERF PE F P
Sbjct: 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNP 296
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +2
Query: 500 EVRVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVW 670
E VDIR L N ++ GGT++ G + R+Q E++ L P + ++KI A ER Y+ W
Sbjct: 337 ECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGS-RLKIHASGHVVERSYASW 395
Query: 671 IGGSILASL 697
+GGSIL+SL
Sbjct: 396 LGGSILSSL 404
Score = 48.0 bits (109), Expect = 2e-06
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +1
Query: 4 KMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 183
K + MF++ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 116 KTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQV 175
Query: 184 LDLAGRDLTDYLMKILTERGYSFTP 258
+G + D L + L ++ + P
Sbjct: 176 QHFSGNAINDILAQTLRDKNFEVMP 200
Score = 33.1 bits (72), Expect = 0.046
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 339 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 443
++ ++ E +E PDG + G ER++ PE LF P
Sbjct: 254 SSETTIAESEFEFPDGSRMMFGAERYQIPEHLFVP 288
Score = 31.5 bits (68), Expect = 0.14
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 702 TFQQMWISKQEYDESG 749
TF Q+WIS+QEY+E G
Sbjct: 406 TFHQLWISRQEYEEHG 421
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 7 MTQIMFKTFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
MT+++F+ +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G +
Sbjct: 134 MTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAK 193
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
R+ G + YL+K+ + SF
Sbjct: 194 RISWGGSQSSSYLLKLFQIKYPSF 217
Score = 34.7 bits (76), Expect = 0.015
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 518 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 682
++ L +N +++GG PG+ R+++E+T++ P I + W G S
Sbjct: 631 QQKLVSNVLITGGLGSLPGMETRIKRELTSIMPVGSSINVFRASNPLLDAWKGAS 685
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 408 ERFRCPEALFQPSFLGMEACGIHE 479
E+ R PE +F PS +G++ GI E
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILE 617
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 50.4 bits (115), Expect = 3e-07
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 512 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-STMKIKII-APPERKYSVWIGGSI 685
++R L N V++GGT++ PG+++R+Q E+ LA S + + +VW GGSI
Sbjct: 338 ELRSPLLNNIVVTGGTSLIPGLSERLQAEVQRLATGSRINVHTAETASATSNAVWFGGSI 397
Query: 686 LASLSN 703
LASL N
Sbjct: 398 LASLDN 403
Score = 49.2 bits (112), Expect = 7e-07
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +3
Query: 264 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 443
+R ++ + KE + V LD + A A+S + K +E PDG G ERFR E LF P
Sbjct: 249 KRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRISEILFNP 305
Query: 444 SFLGMEAC---------GIHETTYNSIMKCE 509
SF + G+HE Y SI+ C+
Sbjct: 306 SFSASRSAETTPPQGSVGLHELVYQSILACD 336
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
+++ + F+ + PA Y+ QAV +A+ ++T +++D G + P+ +G + I
Sbjct: 118 QQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIF 177
Query: 181 RLDLAGRDLTDYLMKILTERGYSFTP 258
+ LAG L + ++ F P
Sbjct: 178 KQSLAGDFLNANIEQLFNTMNIEFPP 203
Score = 31.5 bits (68), Expect = 0.14
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 705 FQQMWISKQEYDESG 749
FQ +W+SKQEYDE G
Sbjct: 404 FQHLWVSKQEYDEVG 418
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 49.2 bits (112), Expect = 7e-07
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 20/98 (20%)
Frame = +3
Query: 264 EREIVRDIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------ 383
E IV +IKE +CYV+ +F+++M S LE Y LPD
Sbjct: 211 ETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIE 270
Query: 384 GQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 497
QV+ + NERF PE LF PS + + GI E S+
Sbjct: 271 QQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSV 308
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +1
Query: 103 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 249
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 512 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 652
+I+ L N V GG +PG R+ E+ +LAP+ ++K+ P +
Sbjct: 314 NIQAMLLENVVTIGGNCKFPGFHKRLSSELRSLAPANWEVKVFEPSD 360
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 49.2 bits (112), Expect = 7e-07
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
E TQ F+ P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 163 ELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQ 222
Query: 181 RLDLAGRDLTDYLMKILTE 237
+L L GR +T +L +L E
Sbjct: 223 QLPLGGRYMTQHLQNLLRE 241
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/84 (20%), Positives = 42/84 (50%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EK+ I+F + + +++ + + +G + V+D G + + EG +P++ +
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
+++ G D+T MK+L + +
Sbjct: 320 KINYGGDDITLLFMKLLMRSHFPY 343
Score = 34.7 bits (76), Expect = 0.015
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 521 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSI 685
K+LY++ ++ GG +PG A +++ I + + I +I PP + ++ W G I
Sbjct: 527 KNLYSSILIVGGAGQFPGFAHLLEERIHSKRANIPTISVIPPPRSMDAQFVAWKGACI 584
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.081
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 44 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P T+P P T PV P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 178
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 17 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 178
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.33
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 17 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 178
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 17 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 178
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P S S ST PP S S + + + SC T ++ PT +T T + P+
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 17 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 175
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P S S ST PP S S + + SC T ++ PT +T T + P+
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PRSCSKHSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
P S S T P S S C+ T +PP T P ST T +P P
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 65 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 169
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 29.1 bits (62), Expect = 0.75
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 244 YSFTPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVA 423
+S +P P+ F +R S A SS + P +P+AP+R PTV++S S A
Sbjct: 328 HSKSPSPA---FTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPVDSA 382
Query: 424 QRLSSNP 444
+ ++ P
Sbjct: 383 EPVAYQP 389
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 244 YSFTPPPSGK--SFVTSRRSCATSLLTSSR--KWPPLHPAAPSRSLTNFPTVRSSLSETK 411
YS PPS S V+S A S L S+ + PPL P P S + + ++ S++
Sbjct: 144 YSKHSPPSTSTSSIVSSSYGDAPSYLAPSKPNRSPPLKPEDPFASFNSSASAIAAASKSA 203
Query: 412 DSVAQRLSSN 441
+ A LSS+
Sbjct: 204 AASASALSSD 213
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 65 PCSRCTRPVVPPVSCWTPATVSPTPCPST 151
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 238 RGYSFTPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFP 381
R Y PP + TSR + A+SL ++S H + S +T P
Sbjct: 480 RRYRVAPPAENEKPHTSRTNTASSLSSTSEDQVSTHGSISSAKVTAIP 527
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 148
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 5.3
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 81 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 233
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 657 STPYGSVDRSSPPSL-TFQQM--WISKQEYDESGPSIVPGSAS 776
S P +VD S L TF+++ SK ++ E+GPSI AS
Sbjct: 394 SVPVAAVDNKSKTHLDTFEKVVDLSSKADFVEAGPSISSSGAS 436
>SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 25.8 bits (54), Expect = 7.0
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Frame = +3
Query: 252 HTTAEREIVRDIKEKLCYVALDF-----EQEMATAASSSSLEKSYEL-----PDGQVITI 401
H A + IV+ I + C+V + F E ++ LEK + P G +
Sbjct: 89 HVEAWKPIVQAIHDNDCFVFIQFWNLPGELKVDYLEDQERLEKVTQGECPMDPTGLPAAL 148
Query: 402 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 503
G+ C E L+ F+ + H TTY K
Sbjct: 149 GSAYSICGEELYVDKFMTKQDIQEHITTYTEAAK 182
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/50 (20%), Positives = 24/50 (48%)
Frame = +2
Query: 494 HHEVRVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 643
H R+D+ +DL A+ G +Y + + + T + P + +++ +
Sbjct: 37 HENNRIDLIRDLLASLSKEGVVAVYNHVRSLLFTDFTEVFPEEVSLRVFS 86
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 7.0
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +1
Query: 256 PPPSGKSFVTSRRSCATSLLTSSRKWPPLHPA-AP---SRSLTNFPTVRSSLSETKDSVA 423
PP G + +TSR S SS+ L P +P SR ++ P++ SS+ D
Sbjct: 234 PPAHGSTSMTSRSKLDDSTDNSSKPRTSLQPGESPMKSSRDISRKPSMASSVLSPSDYFP 293
Query: 424 Q--RLSSNP 444
Q R S P
Sbjct: 294 QHRRFQSAP 302
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 334 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS 498
PP+ +PS SL P S + + S R ++ +S + K + P T S
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPSRKMSPAYTSS 271
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 398 SDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 288
+D VG+ L+ GAAG S GHF EV + + +LL
Sbjct: 350 ADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 289 RRSCATSLLTSSRKWPPLHPAAPSRS-LTNFPTVRSSLSETKDSVAQRLSSNPRS 450
R++ A + +S+ + P++P S L+ FP++ ++SE +Q+ +S+P S
Sbjct: 276 RKTFAKNPTKNSKPAGQVIPSSPFTSTLSRFPSLEGAVSEISLRDSQKHNSHPNS 330
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 712 CWKVREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 599
CW + D T Y RS ++ L CRWG S D
Sbjct: 365 CWTRKHFTNDVQTRQY------RSPEVILGCRWGASAD 396
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +2
Query: 59 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 199
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
>SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 174 HPASGLSRSRPHRLPHEDPHRARLLVHTTAEREIVRDIKEKL 299
+PA+G P RLP + P + H+ + + + D+KE+L
Sbjct: 39 YPATG-----PLRLPFQRPATSCRTFHSKSVEQTIEDVKEQL 75
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 213 LPHEDPHRARLLVHTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 380
LP P R + L E E++R+ EKL AL E++ + SL+++ P
Sbjct: 315 LPENHPQRRQTLEFYEIEIEVLREKVEKL--QALSDEKDFYISKLEKSLDRNDTTP 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,607,371
Number of Sequences: 5004
Number of extensions: 80787
Number of successful extensions: 380
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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