Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0362.Seq
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 2e-43
SB_56| Best HMM Match : Actin (HMM E-Value=0) 172 2e-43
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 172 2e-43
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 3e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 3e-43
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 155 4e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 139 3e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 6e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 1e-26
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 117 1e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 2e-14
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 62 7e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 59 3e-09
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 33 0.26
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 33 0.26
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 32 0.46
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.46
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.60
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 32 0.60
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 31 0.80
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 31 1.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 1.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.4
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 3.2
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 3.2
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 4.2
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 29 4.2
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 29 4.2
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 5.6
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 5.6
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.6
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 5.6
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 29 5.6
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 5.6
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.6
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 5.6
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.6
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 7.4
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 7.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.4
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 7.4
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 7.4
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 28 7.4
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 7.4
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 9.8
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 9.8
SB_24924| Best HMM Match : WHEP-TRS (HMM E-Value=1.1) 28 9.8
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 9.8
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 9.8
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 9.8
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 9.8
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.8
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 28 9.8
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 9.8
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 28 9.8
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 9.8
SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 28 9.8
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 9.8
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 172 bits (419), Expect = 2e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKMTQIMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 177 RLDLAGRDLTDYLMKILTERGYSFT 201
Score = 169 bits (411), Expect = 2e-42
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+
Sbjct: 202 TTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAM 261
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPSFLGME+ GIHETTYNSIMKC+
Sbjct: 262 FQPSFLGMESAGIHETTYNSIMKCD 286
Score = 127 bits (306), Expect = 1e-29
Identities = 65/89 (73%), Positives = 69/89 (77%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 287 VDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 346
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 347 ASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 172 bits (419), Expect = 2e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKMTQIMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 177 RLDLAGRDLTDYLMKILTERGYSFT 201
Score = 172 bits (418), Expect = 3e-43
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+
Sbjct: 202 TTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAM 261
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPSFLGME+ GIHETTYNSIMKC+
Sbjct: 262 FQPSFLGMESAGIHETTYNSIMKCD 286
Score = 129 bits (311), Expect = 3e-30
Identities = 66/89 (74%), Positives = 69/89 (77%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 287 VDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSIL 346
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 347 ASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 172 bits (419), Expect = 2e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKMTQIMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 177
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFT 202
Score = 172 bits (419), Expect = 2e-43
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAM 262
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPSFLGME+ GIHETTYNSIMKC+
Sbjct: 263 FQPSFLGMESAGIHETTYNSIMKCD 287
Score = 128 bits (310), Expect = 4e-30
Identities = 66/89 (74%), Positives = 69/89 (77%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 172 bits (418), Expect = 3e-43
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+
Sbjct: 165 TTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAM 224
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPSFLGME+ GIHETTYNSIMKC+
Sbjct: 225 FQPSFLGMESAGIHETTYNSIMKCD 249
Score = 164 bits (398), Expect = 8e-41
Identities = 76/85 (89%), Positives = 83/85 (97%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
+ M +IMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+
Sbjct: 80 DDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 139
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 140 RLDLAGRDLTDYLMKILTERGYSFT 164
Score = 130 bits (315), Expect = 9e-31
Identities = 67/89 (75%), Positives = 69/89 (77%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 250 VDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSIL 309
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 310 ASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 172 bits (418), Expect = 3e-43
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAM 262
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPSFLGME+ GIHETTYNSIMKC+
Sbjct: 263 FQPSFLGMESAGIHETTYNSIMKCD 287
Score = 171 bits (417), Expect = 4e-43
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKMTQIMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 177
Query: 181 RLDLAGRDLTDYLMKILTERGYSFT 255
RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 178 RLDLAGRDLTDYLMKILTERGYSFT 202
Score = 129 bits (311), Expect = 3e-30
Identities = 66/89 (74%), Positives = 69/89 (77%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 169 bits (411), Expect = 2e-42
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
TTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL
Sbjct: 176 TTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEAL 235
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
QPSFLGME+ GIHETTYNSIMKC+
Sbjct: 236 LQPSFLGMESSGIHETTYNSIMKCD 260
Score = 131 bits (316), Expect = 7e-31
Identities = 66/89 (74%), Positives = 70/89 (78%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSIL
Sbjct: 261 VDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSIL 320
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 321 ASLSTFQQMWISKQEYDESGPAIVHRKCF 349
Score = 103 bits (248), Expect = 1e-22
Identities = 50/56 (89%), Positives = 54/56 (96%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 162
EKMTQIMF+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 155 bits (376), Expect = 4e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = +1
Query: 16 IMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 195
IMF+ FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 196 GRDLTDYLMKILTERGYSFT 255
GRDLTDYLMK++TERGYSFT
Sbjct: 61 GRDLTDYLMKLMTERGYSFT 80
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEM 332
TTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 81 TTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 139 bits (336), Expect = 3e-33
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
E+M Q+MF++FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2162 ERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQ 2221
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
R+DLAGRDLT YL +++TERGYSF
Sbjct: 2222 RIDLAGRDLTHYLQRLVTERGYSF 2245
Score = 105 bits (253), Expect = 3e-23
Identities = 47/85 (55%), Positives = 62/85 (72%)
Frame = +3
Query: 255 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 434
+TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E L
Sbjct: 2247 STAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPL 2306
Query: 435 FQPSFLGMEACGIHETTYNSIMKCE 509
FQPS LG + GIHE+ + SI KC+
Sbjct: 2307 FQPSLLGRDIDGIHESIFKSIKKCD 2331
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (300), Expect = 6e-29
Identities = 51/84 (60%), Positives = 73/84 (86%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EK ++ F+TFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+
Sbjct: 143 EKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIM 202
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
R D+AGRD++ YL +L + G+ F
Sbjct: 203 RTDIAGRDVSRYLRLLLRKEGHCF 226
Score = 32.3 bits (70), Expect = 0.46
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPG 574
+D+R+ LY+N VLSGG+T++ G
Sbjct: 270 LDLRRVLYSNIVLSGGSTLFKG 291
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 117 bits (281), Expect = 1e-26
Identities = 49/84 (58%), Positives = 67/84 (79%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EKM ++MF+ + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTR 180
Query: 181 RLDLAGRDLTDYLMKILTERGYSF 252
RLD+AGRD+T YL+K++ RGY+F
Sbjct: 181 RLDIAGRDITKYLIKLMLLRGYAF 204
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +3
Query: 258 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 437
TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEALF
Sbjct: 207 TADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALF 266
Query: 438 QPSFLGMEACGIHETTYNSIMKCE 509
QP + +E G+ E +N+I +
Sbjct: 267 QPHLINVEGVGVAELLFNTIQAAD 290
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 610
+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 291 IDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 443 LVLGYGSLRHPRDHI*LHHEVRVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA-LAPS 619
+VL GS +P L E+ K LY VL G T+ Q +TA
Sbjct: 301 IVLSGGSTMYPGLPSRLEREI-----KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQ 355
Query: 620 TMKIKIIAPPERKYSVWIGGSILASL 697
KI+I PP RK+ V++GG++LA +
Sbjct: 356 KFKIRIEDPPRRKHMVFMGGAVLADI 381
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 117 bits (281), Expect = 1e-26
Identities = 58/89 (65%), Positives = 66/89 (74%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
VDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSIL
Sbjct: 61 VDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSIL 120
Query: 689 ASLSNLPTDVDLETGVRRVWPLHCTRKCF 775
ASLS + P RKCF
Sbjct: 121 ASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 100 bits (239), Expect = 2e-21
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +3
Query: 342 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCE 509
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKC+
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCD 60
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 180
EK+T++MF+ +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+
Sbjct: 50 EKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIV 109
Query: 181 RLDLAGRDLTDYLMKILTERGYSFTPP--PSGKSFVTSRRSCATSLLTSS 324
R LAG +T ++ E PP + K S T ++T+S
Sbjct: 110 RSPLAGDFITAQCRQMFEETNVEVIPPYMVASKGIEGSTAMGVTQVVTTS 159
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII---APPERKYSVWIGG 679
+DIR L+ + +++GG T+ G +R+ +E+ + P +M++K+I + E++++ WIGG
Sbjct: 165 IDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGG 224
Query: 680 SILASLSNLPTDVDL 724
SILASL + + VDL
Sbjct: 225 SILASLVCVHSLVDL 239
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 61.7 bits (143), Expect = 7e-10
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 28 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 204
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 205 LTDYLMKILTERGYSFTPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPT 384
+T ++ ++L ER P S ++ T + ++++ + P++ + + +
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFAK-YEQEPAKWIKKYES 156
Query: 385 VRSSLSETKDSVAQRLSSNPRSWVWK 462
+ + ++ + P W+ K
Sbjct: 157 INAVTTKILLRQFAKYEQEPAKWIKK 182
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 16/78 (20%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKII 640
+D+R+ LY N VLSGG+TM+ R+Q++I + P ++ ++I
Sbjct: 236 IDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVI 295
Query: 641 APPERKYSVWIGGSILAS 694
+ ++Y+VW GGS+LAS
Sbjct: 296 SHHMQRYAVWFGGSMLAS 313
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +3
Query: 270 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 449
+IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P
Sbjct: 838 QIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDL 897
Query: 450 L 452
L
Sbjct: 898 L 898
Score = 57.6 bits (133), Expect = 1e-08
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +1
Query: 61 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 237
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 238 RGYSFTPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTV 387
RG++FT SG V + L K +H + LT F T+
Sbjct: 827 RGHNFT-SSSGWQIVNDIKEKICYLSKDHLK--EVHNYKTNEGLTKFYTL 873
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Frame = +2
Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKY 661
+D RK L N VL GGT M PG R+ +EI L S +K+ PP
Sbjct: 71 IDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANI 130
Query: 662 SVWIGGSILASLSNL 706
+ W+GG+I SL L
Sbjct: 131 TAWLGGAIFGSLEVL 145
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 36.3 bits (80), Expect = 0.028
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 301 ATSLLTSSRKWPPL--HPAAPSRSLTNFP---TVRSSLSETKDSVAQRLSSNPRSWVWKL 465
+TS +T S K+PP+ +PA PS L P TV SLS T S+P S V L
Sbjct: 452 STSSITGSSKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDL 511
Query: 466 AASTRPHI 489
+ S+ P++
Sbjct: 512 SCSSDPNV 519
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 181
P CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1518 PVGCSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSC 109
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 57 PSTPCTHSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCT-----RPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
P + S ST ++PS PC+ T P P C TP+T S PST T S TP
Sbjct: 42 PSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPC-TPSTPSTPSTPSTPSTPS-TP 99
Query: 176 S 178
S
Sbjct: 100 S 100
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCT--RPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + S ST +PS PC+ T P P P + TP+T S T PST T S TPS
Sbjct: 407 PSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS-TPS 465
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 20 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 178
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 26 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 178
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 640 PSTPSTPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 252 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 301
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 802 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 851
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 175
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 41 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 178
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 29 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 142
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 11 PRSCSKHST--RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 142
P+ C T PC SPS P + P C+T T+SP PC
Sbjct: 497 PKPCFTFLTLSTKPCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 PRSCSKHSTRP-PCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P S + T P P T SP+ P P P + TP T +PT TK T + TP+
Sbjct: 44 PTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 35 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +2
Query: 11 PRSCSKHSTRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 172
P + T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 84 PTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 178
P + T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 178
P + ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 39 PSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 32 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 172
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 172
P + ++ + P +P+ P + P ++ TPAT TP T H+PT
Sbjct: 61 PTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP-TPTKPTPTAHTPT 113
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 136
P + + + P +P+KP + P P + TP T +PT
Sbjct: 107 PTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Frame = +1
Query: 13 QIMFKTFNT-PAMYVAIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPI 147
Q +FK P + + AVL+L AS RT TG V+DSGDGV+H +P+
Sbjct: 319 QCIFKYLRAEPEDHYFLLAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 162
+ M +I+F+ +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 163 LPHAILR 183
+ A+ R
Sbjct: 379 IKKAVRR 385
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 240 RLLVHTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 383
R +H E ++ +KE CYV+ F ++M A +++ + Y LPD
Sbjct: 384 RRQLHVLDETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +2
Query: 44 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 169
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 20 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 142
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 44 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 142
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 175
PR KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 200 PRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 50 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 38 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 166
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 423 PEALFQPSFLGMEACGIHET 482
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 175
P + H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 131 PCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCV 184
PR+ H+T+P T P T+P P T P T P T H+ P +
Sbjct: 36 PRTTKPHTTKPHTTKPHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTI 94
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
P++ H+ +P T P R T+P P + T PT P T H+ P
Sbjct: 101 PKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKP 156
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTKDTHSPTP 175
PR+ H+T+P T P T+P P T PT P T H+ P
Sbjct: 121 PRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKP 176
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/68 (39%), Positives = 30/68 (44%)
Frame = +3
Query: 51 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 230
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 231 HRARLLVH 254
R+R H
Sbjct: 270 SRSRSPTH 277
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +3
Query: 45 HVRRHPSRALAVRVRSYHRYRAGLRRR-----CLPHRAHLRRIRTPPRHPASGLSRSRPH 209
H RR SR+ + R R R+ RRR HR+H R R+ SRS H
Sbjct: 218 HHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTH 277
Query: 210 RLPHEDPHRARLLVHTTAEREIVRDIKEK 296
R H H E++ +D K K
Sbjct: 278 RRHRSRSHSPEKKKHKKKEKK-EKDEKRK 305
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
P+ C+ + PP KPC + + +V PV+ P TPCP+ + PTPS
Sbjct: 807 PQDCAAGTYSPPGFGTCKPC-QSGKKLVNPVN---PGATYCTPCPA--GSSCPTPS 856
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 15 DHVQNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 161
DH Q I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 11 PRSCSKHST-RPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
P+ + ST PP T P+ P S P VP + P V+P P + PTP
Sbjct: 321 PQMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 154
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 197 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 60
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 197 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 60
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 197 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 60
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 32 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 29 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 32 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 196
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 32 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 32 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 56 PSKPCSRCTRPVVPP 100
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
PR S + P P KP + P PP P+T P P P D P+
Sbjct: 1044 PRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPA 1099
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 44 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 142
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 44 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 148
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 175
PR+ + +T P T+P R T PV TP T +P T P T + TP
Sbjct: 171 PRTTTPETTTPETTTP-----RTTTPVTTTPRTTTPETTTPETTTPRTTTPETTTP 221
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 172
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 191 PVTTTPRTTTPETTTPETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPS 244
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 29 HSTRPPCTSPSKPCSRCT-RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 184
+S P SPS P RP PP+ P + TP P + T P P+ V
Sbjct: 582 YSPSSPSYSPSSPSFHHNLRPTPPPLPLSIPLLLQATP-PHLQSTAQPRPTTV 633
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 353 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 439
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 353 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 439
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIV 108
E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 544 EELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 1 EKMTQIMFKTFNTPAMYVAIQAVLSLYASGRTTGIV 108
E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 423 EELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 77 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 3 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 59
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 36 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 92
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 69 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 125
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 295 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 420
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 359 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 478
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 38 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 391 SSLSETKDSVAQRLSSNPRSWVWK 462
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 187
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 351 HPHVYSRVKSNHPHVYSRVRRNHSHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 407
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 505 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 561
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 538 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 594
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 571 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 627
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ N S V+ S PH+ S S HP
Sbjct: 340 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVRRN-HSHVYSRVKSNHPHVY-SRVKSNHP 396
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 343 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SASGHP 519
HP SR +N P V S + V R+ SN V+ S PH+ S S HP
Sbjct: 494 HPHVYSRVKSNHPHVYSRVRSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 550
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 80 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 184
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 288 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 428
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 56 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 199
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 26 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 178
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 30 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 197
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 198 SRPH 209
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 53 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 175
P S S S P SP P S P P S ++P+ SP+ S+ SP P
Sbjct: 4 PDSPSPSSPSPDSPSPDSPSSYSPSPDSP--SSYSPSLDSPSSYSSSSYLPSPDP 56
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +3
Query: 18 HVQNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 197
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 198 SRPHRLPHEDPHRARL 245
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 536 NTVLSGGTTMYPGIADRMQKEITALAP 616
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 77 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 196
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 132 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 233
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 20 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 172
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +1
Query: 259 PPSGKSFVTSRRSCATSLLTSSRKWPPL-------HPAAPSRSLTNFPTVRSSLSET 408
PP ++ V S+ + A +L ++ W PAAPS T PTV++++ T
Sbjct: 502 PPVAQTTVPSQETTAQQMLKAAAAWQQATGQTLQYQPAAPSAYQTQQPTVQATVQAT 558
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 684 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 511
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 17 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 178
+C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 39 TCTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA-TVSPTPCPSTKDTHSPTP 175
P + H+T +P P S P + +TPA TV P +++ T SP P
Sbjct: 63 PAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAP 118
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 389 LTVGKFVRLLEGAAGCSGGHF 327
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 33 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 209
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRH 412
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 467 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 517
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 23 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 154
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_24924| Best HMM Match : WHEP-TRS (HMM E-Value=1.1)
Length = 1002
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -2
Query: 324 ARSQERRSTASP*CHERFPARRWCERVAALGEDLHEVVCEVATG*VQTQDGVG 166
A S RR T CH R +WC+ A E + VV + A V T+ G+G
Sbjct: 538 ADSSRRRPTGVHRCHIRKGGAQWCKARGAKSE-VCRVVPQEAWVRVTTRSGLG 589
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 64 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 114
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 26 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 181
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +2
Query: 11 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 172
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 1792 PETTTPETTTPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPS 1845
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 27.9 bits (59), Expect = 9.8
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +3
Query: 138 RAHLRRIRTPPRHPASGLSRS---RPHRLPHEDPHRARLL--VHTTAE--REIVRDI-KE 293
R LRR+R P S S P +P E+P + H E R V+D+ ++
Sbjct: 478 RKQLRRVRPLDNEPGSVREASWKDEPEPVPEEEPDVDLVFRDPHLQVEKVRLNVQDVTRD 537
Query: 294 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 398
+ +D E+E+ + S +E S PD Q I+
Sbjct: 538 EARAKPIDEEEELTEEETGSIIEHSSPEPDSQDIS 572
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 139
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 41 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 172
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 62 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 181
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 510 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 560
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 434 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 484
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 568 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 618
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +3
Query: 12 PDHVQNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGL 191
PDH + R P L V R+ + GL +R PH T P HP
Sbjct: 333 PDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGLSKSTAPDHPHGVS 388
Query: 192 SRSRPHRLPH 221
R+ P PH
Sbjct: 389 KRTAPDH-PH 397
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R H TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 65 RRAPTHKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 115
>SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 223
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 127 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 177
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 44 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 190
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 14 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 148
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 491 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 541
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,825,158
Number of Sequences: 59808
Number of extensions: 718483
Number of successful extensions: 3402
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3307
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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