Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0362.Seq
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             132   5e-33
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.4  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.8  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  132 bits (318), Expect = 5e-33
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = +2

Query: 509 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 688
           VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSIL
Sbjct: 62  VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSIL 121

Query: 689 ASLS 700
           ASLS
Sbjct: 122 ASLS 125



 Score =  131 bits (316), Expect = 8e-33
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +3

Query: 327 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 506
           EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 507 E 509
           +
Sbjct: 61  D 61



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 702 TFQQMWIS 725
           TFQQMWIS
Sbjct: 126 TFQQMWIS 133


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 512 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 673
           DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +WI
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--IWI 398


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 334 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPR 447
           PP    +     +  P   S LS T  ++A+ L   PR
Sbjct: 678 PPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPR 715


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 75  AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 206
           ++  +++HR        C P   +L +I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 541 RIVRWYHHVPWNRRPYAK 594
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 541 RIVRWYHHVPWNRRPYAK 594
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 135 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 43
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,144
Number of Sequences: 438
Number of extensions: 6070
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)