Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0361.Seq
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 89 3e-18
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 8e-18
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 79 2e-15
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 76 2e-14
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 75 4e-14
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 74 6e-14
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 72 3e-13
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 71 6e-13
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 71 6e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 71 8e-13
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 70 1e-12
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 70 1e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 69 2e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 69 2e-12
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 64 9e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 62 3e-10
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 58 4e-09
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 54 5e-08
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 50 9e-07
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 50 9e-07
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 46 3e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 45 3e-05
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 45 4e-05
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 44 8e-05
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 42 2e-04
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 42 4e-04
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 42 4e-04
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 40 0.001
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 38 0.005
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 36 0.020
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.027
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 35 0.035
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 32 0.25
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_42261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 27 9.4
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 27 9.4
SB_35416| Best HMM Match : Cyanate_lyase (HMM E-Value=0.076) 27 9.4
SB_25313| Best HMM Match : REJ (HMM E-Value=0.012) 27 9.4
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18) 27 9.4
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 101 bits (242), Expect = 4e-22
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYI 435
P +HGD+ QQER+E L F++GR +L+AT+VAARGLD+D +K VINFD P+ ++Y+
Sbjct: 988 PTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYV 1047
Query: 436 HRIGRTGRSKSKGTSYAFW 492
HRIGRTGR +KG + F+
Sbjct: 1048 HRIGRTGRIGNKGKATTFF 1066
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
+E+++LA D+L DY+ + +G + +I Q V ++EK ++L +L + G
Sbjct: 909 EEIQRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRLTQILGDAGTD---- 963
Query: 182 AKTIIFVETKRKAE 223
+T++FVE+KR A+
Sbjct: 964 -RTLVFVESKRSAD 976
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+HGD++Q+ER+E L F+ G ILVAT VAARGLD+ +K VINFD P E+Y+HRIG
Sbjct: 1130 IHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIG 1189
Query: 448 RTGRSKSKGTSYAFW 492
RTGR G + +F+
Sbjct: 1190 RTGRVGHTGLATSFF 1204
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
KE++ LA D+L +YI + +G + S + NI Q V E +K + L LL G P
Sbjct: 1046 KEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDLLNASG----PQ 1100
Query: 182 AKTIIFVETKRKAENISRNIRRYG 253
T++FVETK+ A+ + + + G
Sbjct: 1101 QLTLVFVETKKGADALEMFLAKDG 1124
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
KEV+ LA D+L DY+ I +GSL L+ANH ILQIVD+C++HEKE+ + + G
Sbjct: 249 KEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIG--GIVILSS 306
Query: 182 AKTIIFVETKRKAENISRNIRRYGC 256
+T+IF ETKR+A+ ++R +R GC
Sbjct: 307 LQTLIFTETKRRADELTRKLRSDGC 331
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +1
Query: 373 DVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYPVKFRQAK 519
D+ IK VINFD+PN +EDY+HRIGRT RS GTSY F+ +QAK
Sbjct: 351 DISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAK 399
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 87.0 bits (206), Expect = 8e-18
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + K ++ +E MHGD Q+ER+ ++ F+ G++ +L++TDV ARGLD
Sbjct: 242 FCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLD 301
Query: 376 VDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
V + VIN+D PN+ E YIHRIGR+GR KG + F
Sbjct: 302 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 339
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +1
Query: 286 QQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSK 465
Q +R++ L FK G A IL+ATDVA+RGLD+ I VIN+D+P EDY+HR+GRTGR+
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAG 137
Query: 466 SKGTSYAF 489
GTS F
Sbjct: 138 RSGTSLTF 145
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
A +HG + Q++R+ L K G ILVATDVA RG+D+ + VIN+D + EDY H
Sbjct: 311 ATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTH 370
Query: 439 RIGRTGRSKSKGTSYAF 489
RIGRTGR+ G + +F
Sbjct: 371 RIGRTGRAGKTGIAVSF 387
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+HGD Q++R+ L F+EG+ LVATDVAARGLD+ I V+ + P + YIHR G
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSG 393
Query: 448 RTGRSKSKGTSYAFWYP 498
RTGR+ +G F+ P
Sbjct: 394 RTGRAGREGICIVFYKP 410
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H +K Q R +++ F++G+ ILVATDVA+RGLD + VIN+D P++ E YIHR G
Sbjct: 362 LHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCG 421
Query: 448 RTGRSKSKGTSYAF 489
RTGR G + +F
Sbjct: 422 RTGRIGHHGIATSF 435
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 74.1 bits (174), Expect = 6e-14
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +1
Query: 232 KEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDY 411
+E + + L A G+ + R E +F+ A ILV TD+A+RGLD + VINFD+
Sbjct: 714 EEREVVALRATKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDF 773
Query: 412 PNSSEDYIHRIGRTGR 459
PNS DYIHR+GRTGR
Sbjct: 774 PNSMVDYIHRVGRTGR 789
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = +1
Query: 229 IKEHQEIW----LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*V 396
+K H E+ LP + +HG + QQ+R ++F ++ IL+ TDVAARGLD+ + +
Sbjct: 831 VKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWI 890
Query: 397 INFDYPNSSEDYIHRIGRTGR-SKSKGTSYAFWYP 498
+ +D + ++YIHR+GRT R ++ KG + F P
Sbjct: 891 VQYDPADDPKEYIHRVGRTARGTEGKGHALLFLLP 925
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYI 435
PA+C+H Q+ER QFK +LVAT++ RG+D++ + V N+D P S+ Y+
Sbjct: 361 PAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYL 420
Query: 436 HRIGRTGRSKSKGTSYAF 489
HR+ R GR +KG + F
Sbjct: 421 HRVARAGRFGTKGLAITF 438
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 71.3 bits (167), Expect = 4e-13
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
MHGD +Q+ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHR
Sbjct: 360 MHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHRCT 419
Query: 448 RTGRSKS 468
+KS
Sbjct: 420 DDDDTKS 426
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.9 bits (166), Expect = 6e-13
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSS 423
E+ +H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +S
Sbjct: 313 ELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNS 372
Query: 424 EDYIHRIGRTGR 459
E Y+HRIGR+GR
Sbjct: 373 ETYLHRIGRSGR 384
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.9 bits (166), Expect = 6e-13
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSS 423
E+ +H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +S
Sbjct: 313 ELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNS 372
Query: 424 EDYIHRIGRTGR 459
E Y+HRIGR+GR
Sbjct: 373 ETYLHRIGRSGR 384
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 70.5 bits (165), Expect = 8e-13
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSS 423
++ L V +H +Q ER L +FK G ILVATDVA+RGLD+ ++ V+N + P
Sbjct: 269 KLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADP 328
Query: 424 EDYIHRIGRTGRSKSKG 474
+DYIHR+GRT R+ G
Sbjct: 329 KDYIHRVGRTARAGRGG 345
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +1
Query: 265 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRI 444
C G +TQ +R E + + K IL++TD+ ARG+D + + V+N D P++ E Y+HRI
Sbjct: 243 CTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRI 302
Query: 445 GRTGRSKSKGTSYAF 489
GR GR ++G + +
Sbjct: 303 GRAGRFGTEGMAVTY 317
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 69.7 bits (163), Expect = 1e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H D+TQ +RD ++ F+ G+ +L+AT++ RG+D G+ VIN+D+P S+ YIHRIG
Sbjct: 413 IHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
AV +HGDK+Q+ER + +F +G +LVATDVA++GLD I+ VINFD P E+Y+
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVL 173
Query: 439 RIGR 450
G+
Sbjct: 174 LCGQ 177
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
AV +HGDK+Q+ER + +F +G +LVATDVA++GLD I+ VINFD P E+Y+
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVL 173
Query: 439 RIGR 450
G+
Sbjct: 174 LCGQ 177
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H Q++R + L +FK +L+ATDVAARGLD+ I+ VI++ P E Y+HR G
Sbjct: 486 LHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEVYVHRSG 545
Query: 448 RTGRSKSKGTS 480
RT R+ +G S
Sbjct: 546 RTARASHEGLS 556
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
+ +HG K + R ++ F++ + ILV TDV ARG+D+ + VI +D P+S+ ++HR
Sbjct: 119 MALHG-KMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHR 177
Query: 442 IGRTGRSKSKGTSYAFWYPVK 504
GRT R ++G + F P +
Sbjct: 178 CGRTARIGNEGNAVVFLLPTE 198
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSS------ED 429
+ G+ T ++R VL +F+ G+ +L+ T+V+ARG+DV+ + VIN+D P E
Sbjct: 374 LSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFET 433
Query: 430 YIHRIGRTGRSKSKGTSYAF 489
Y+HRIGRTGR G + F
Sbjct: 434 YLHRIGRTGRFGKSGIAVNF 453
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 313 QFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 486
+F+ + ++V TDVAARG+D+ + VINF +P ++ ++HR+GR R+ GT+Y+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVARAGRSGTAYS 577
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 58.0 bits (134), Expect = 4e-09
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +1
Query: 313 QFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F
Sbjct: 7 QFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 65
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 54.4 bits (125), Expect = 5e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK 390
+HG+ TQ +R E L +FK G ILVATD+AARGLD+ G+K
Sbjct: 38 LHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGVK 78
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 50.4 bits (115), Expect = 9e-07
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 364 RGLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
RG+D+ + VINFD+P +SE Y+HRIGR+GR
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGR 36
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 50.4 bits (115), Expect = 9e-07
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 364 RGLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
RG+D+ + VINFD+P +SE Y+HRIGR+GR
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGR 36
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 274 GDKTQQERDEVLYQFKEG-RASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGR 450
G TQ+E++EV+ +F+ G +I++AT VA GLD+D VI +D + + GR
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSVQSRGR 656
Query: 451 TGRSKSKG 474
R+K+ G
Sbjct: 657 V-RTKTGG 663
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
+Q+E+ EV+++F+ G + LV+T V GLD+ + ++ FD S + R+GRTGR
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGRK 624
Query: 463 K 465
+
Sbjct: 625 R 625
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 307 LYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
L F+ G+ +LV T+ RGLD + V + P + E+Y+H GR GR GT+
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTA 528
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGR 450
H + +R +V +F G + AT GLD ++ +I+++ P S E Y+ IGR
Sbjct: 819 HAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGR 878
Query: 451 TGRSKSKGTSYAF 489
GR + F
Sbjct: 879 AGRDGKPSHCHVF 891
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFK--EGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
+H ++ +D +L FK +G +LVAT G+D G+ I+F + E +I
Sbjct: 206 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQE 265
Query: 442 IGRTGRSKSKGTSYAFW 492
GR GR SY +
Sbjct: 266 TGRAGRDWKSSFSYLLY 282
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 292 ERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKS 468
++++VL F++ + ++LVAT V GLDV V+ FD+P + Y+ GR R+K+
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQSKGR-ARAKN 189
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 274 GDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRT 453
G + ++E++ + Q S + A+RGLD+ + VI D+ + +HR+GRT
Sbjct: 80 GTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQMLHRVGRT 139
Query: 454 GRSKSKG 474
R+ S G
Sbjct: 140 ARAGSHG 146
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQF--KEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
+H + +L F ++G +L+AT G+D G+K VI++ S E YI
Sbjct: 324 LHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQE 383
Query: 442 IGRTGRSKSKGTSY 483
GR GR S +Y
Sbjct: 384 TGRAGRDGSNSVAY 397
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 322 EGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYP 498
E R+ ++VAT G+D ++ VI+ + S E+Y GR GR + + + F+ P
Sbjct: 350 ESRSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYRP 408
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
L A H +RD+V ++ EG+ +++ AT G+D ++ V ++ P S E Y
Sbjct: 273 LSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMGVDKGDVRFVAHWSLPQSMEGY 332
Query: 433 IHRIGRTGR 459
GR GR
Sbjct: 333 YQESGRAGR 341
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 331 ASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
A + V + + A L + + VINFD P + E+Y+H+IGR GR + G S +F
Sbjct: 380 AVVFVESKLGADML-AEAVSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISF 431
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFD 408
+QQE++ ++ +FK+G +IL+AT VA GLD+ VI +D
Sbjct: 983 SQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYD 1024
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFK--EGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
+H ++ +D +L FK +G +LVAT G+D G+ ++F + E +I
Sbjct: 237 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQE 296
Query: 442 IGRTGRSKSKGTSYAFW 492
G GR SY +
Sbjct: 297 TGHAGRDGKSSFSYLLY 313
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 KSRTWCENNNFC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASI-- 339
K+ +C++ N C + E + E+ E H + EVL +F + + I
Sbjct: 258 KTIIYCKSINACGDIY---EVLSENVESKETYAMFHSKTPDSIQKEVLGEFIKSNSKIRV 314
Query: 340 LVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
+VAT G+D+ + +I+F P+ E Y+ IGR GR
Sbjct: 315 VVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGR 354
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVA 360
+HGD Q ER +VL QFK+ ILVATDVA
Sbjct: 759 LHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 292 ERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
E++ +L F+ GR +L++T V GLDV V+ FD + + + GR R
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNLKSLVQSRGRASR 660
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRI- 444
+H E+D V+ +F +G + +L++T V G+DV ++ D +H++
Sbjct: 98 LHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLR 157
Query: 445 GRTGRSKSKG 474
GR GR G
Sbjct: 158 GRIGRGNLPG 167
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 394 VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
++N D+ EDYIHR+GRT R+ G S F
Sbjct: 119 ILNMDF--EKEDYIHRVGRTARAGRSGRSVTF 148
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
T+ E+ EV+ +F+ A L+AT+ G D + V + P + ++ GR GR+
Sbjct: 1078 TENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRA 1137
Query: 463 KSKGTSYAFW 492
+ + ++
Sbjct: 1138 GNNAKAIIYY 1147
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGL 372
+P + ++G + Q +R + +F + +L ATD+AARGL
Sbjct: 300 IPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 367 GLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
G+D+ + +I++ P+ E Y+ IGR GR
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGR 32
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 412 PNSSEDYIHRIGRTGRSKSKGTSYAFWYPVKFRQAK 519
P E Y IGR GR + Y F+ P F ++
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGDFATSR 268
>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 375 IKPSSCN---ISCYKNTSTTFLELIQNFISFLLSFIAM 271
+ P CN ++ YKN ST F+E I N S L M
Sbjct: 238 LSPGGCNCHLVTIYKNHSTLFIEAIPNIQSQRLGIFLM 275
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 252 PYLLMFLDMFSAFLLVSTKIIVFAP 178
PY + +D F AF VS ++ VF P
Sbjct: 2805 PYFVRIIDAFGAFAQVSGEVQVFLP 2829
>SB_42261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -3
Query: 345 YKNTSTTFLELIQNFISFLLSFIAMHTNSWQPYLLMFLDMFSAFLLVSTKIIVFA 181
Y T T++L +I F+ FL + +W L+++ + + LLVS+ +++ A
Sbjct: 243 YFVTITSWLIIIAVFLLFLFKVYNRLSINWNVVLVVYCTVTAFMLLVSSALVLDA 297
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 165 CPISCNNTFNLFSFSCS 115
C CNNTF +S SCS
Sbjct: 590 CEHQCNNTFGSYSCSCS 606
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +2
Query: 113 QEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGCQ 259
+EH++ + +++ ++ + G K + + ETK KA ++ +GC+
Sbjct: 914 KEHKRRREEKGKIEKQHETTKDGRKDVKYTETKAKAPSLQLCDVSFGCE 962
>SB_35416| Best HMM Match : Cyanate_lyase (HMM E-Value=0.076)
Length = 646
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 125 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG-CQLFVCMAIKLNKK 295
K K+N LQE G+ +P + +FV + N+ + R C C I + K
Sbjct: 171 KVQKVNAALQEKGEQDKPTLERQLFVAESTQLTNLVDQVNRNSRCATPGCQGILIPAK 228
>SB_25313| Best HMM Match : REJ (HMM E-Value=0.012)
Length = 379
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 252 PYLLMFLDMFSAFLLVSTKIIVFAP 178
PY + +D F AF VS ++ VF P
Sbjct: 176 PYFVRIIDAFGAFAQVSGEVQVFLP 200
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VI 399
H T ERD + F++G +LVAT G+++ + +I
Sbjct: 561 HAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNLPARRVII 603
>SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18)
Length = 184
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 165 CPISCNNTFNLFSFSCS 115
C CNNTF +S SCS
Sbjct: 68 CEHQCNNTFGSYSCSCS 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,212,920
Number of Sequences: 59808
Number of extensions: 277276
Number of successful extensions: 867
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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