Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0361.Seq
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 127 5e-30
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 92 3e-19
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 92 3e-19
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 92 3e-19
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 91 3e-19
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 91 3e-19
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 91 3e-19
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 90 8e-19
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 90 8e-19
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 89 1e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 88 3e-18
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 88 3e-18
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 88 3e-18
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 87 7e-18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 87 7e-18
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 85 2e-17
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 85 3e-17
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 85 3e-17
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 85 3e-17
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 84 7e-17
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 84 7e-17
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 83 9e-17
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 83 2e-16
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 79 1e-15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 75 3e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 75 3e-14
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 73 9e-14
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 73 2e-13
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 72 2e-13
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 71 4e-13
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 7e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 71 7e-13
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 60 9e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 60 9e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 58 5e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 56 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 55 3e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 54 5e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 54 5e-08
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 52 3e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 43 1e-04
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 41 5e-04
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 41 5e-04
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 41 6e-04
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 40 8e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.002
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 39 0.002
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 39 0.002
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 36 0.018
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 36 0.023
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.054
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 31 0.50
U41559-2|AAC24261.1| 135|Caenorhabditis elegans Hypothetical pr... 30 0.87
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 30 0.87
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 29 2.7
Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 27 8.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 127 bits (306), Expect = 5e-30
Identities = 61/113 (53%), Positives = 78/113 (69%)
Frame = +1
Query: 181 CENNNFC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVA 360
C+ F + K+ E + + P +C+HGDK Q ERD VL +FK G+ I++ATDVA
Sbjct: 377 CKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVA 436
Query: 361 ARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYPVKFRQAK 519
ARGLDVD IK VIN+DYPN+SEDY+HRIGRTGRS KGT+Y F+ +AK
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAK 489
Score = 89.8 bits (213), Expect = 1e-18
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
KEV+ LA D+ D +N+GSL+L+ANHNI Q+VDI +EH K+ KL LL I +E
Sbjct: 319 KEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKE-- 376
Query: 182 AKTIIFVETKRKAENISRNIRRYG 253
KTIIFVETKRKA+ ++R +RR G
Sbjct: 377 CKTIIFVETKRKADELTRAMRRDG 400
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 631 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 691 IHRIGRTGRVGNSGRATSF 709
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 631 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 691 IHRIGRTGRVGNSGRATSF 709
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 631 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 691 IHRIGRTGRVGNSGRATSF 709
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 91.5 bits (217), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 842 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 902 IHRIGRTGRVGNAGRATSF 920
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 91.5 bits (217), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 842 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 902 IHRIGRTGRVGNAGRATSF 920
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 91.5 bits (217), Expect = 3e-19
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ VIN+D P++ +DY
Sbjct: 842 VPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 901
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 902 IHRIGRTGRVGNAGRATSF 920
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 90.2 bits (214), Expect = 8e-19
Identities = 43/108 (39%), Positives = 63/108 (58%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + K ++ E C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+D
Sbjct: 274 FCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGID 333
Query: 376 VDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYPVKFRQAK 519
V + VIN+D P++ E+YIHRIGR+GR KG + F RQ K
Sbjct: 334 VQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLK 381
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 90.2 bits (214), Expect = 8e-19
Identities = 43/108 (39%), Positives = 63/108 (58%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + K ++ E C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+D
Sbjct: 274 FCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGID 333
Query: 376 VDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYPVKFRQAK 519
V + VIN+D P++ E+YIHRIGR+GR KG + F RQ K
Sbjct: 334 VQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLK 381
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 89.4 bits (212), Expect = 1e-18
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +1
Query: 265 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRI 444
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 10 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 69
Query: 445 GRTGRSKSKGTSYAFWYPVKFRQAK 519
GR+GR KG + F RQ K
Sbjct: 70 GRSGRFGRKGVAINFVTENDARQLK 94
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 88.2 bits (209), Expect = 3e-18
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVC-MHGDKTQQERDEVLYQFKEGRASILVATDVAARGL 372
F QEK+ + + + +V +HG Q +RD + FK G +LVAT VAARGL
Sbjct: 557 FVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGL 616
Query: 373 DVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYP 498
DV + V+N+D PN EDY+HR+GRTGR+ KG +Y F P
Sbjct: 617 DVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLP 658
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
+ ++ LA L ++I +G + + +I Q IC EH+K K LL+ +G E G
Sbjct: 497 RHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLK---LLELLGMYYEEG 552
Query: 182 AKTIIFVETKRKAENISRNIRRYG 253
+ +I+FV+ + KA++I + R G
Sbjct: 553 S-SIVFVDKQEKADDIVDQLMRTG 575
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+ E YIHRIG
Sbjct: 295 MHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIG 354
Query: 448 RTGRSKSKGTSYAF 489
R+GR KG + F
Sbjct: 355 RSGRFGRKGVAINF 368
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+ E YIHRIG
Sbjct: 295 MHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIG 354
Query: 448 RTGRSKSKGTSYAF 489
R+GR KG + F
Sbjct: 355 RSGRFGRKGVAINF 368
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 87.0 bits (206), Expect = 7e-18
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER L F+ G +L+AT V RGLD+ G+ VIN+D PN+ +DY
Sbjct: 588 VPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDY 647
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 648 IHRIGRTGRVGNSGRATSF 666
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 87.0 bits (206), Expect = 7e-18
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ +HG + Q+ER L F+ G +L+AT V RGLD+ G+ VIN+D PN+ +DY
Sbjct: 588 VPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDY 647
Query: 433 IHRIGRTGRSKSKGTSYAF 489
IHRIGRTGR + G + +F
Sbjct: 648 IHRIGRTGRVGNSGRATSF 666
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 85.4 bits (202), Expect = 2e-17
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
V +HGD Q ER+E L +F++ ++ ILVATDVAARGLD+ I+ VINFD + ++HR
Sbjct: 539 VLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHR 597
Query: 442 IGRTGRSKSKGTSY 483
IGRTGR+ KGT+Y
Sbjct: 598 IGRTGRAGHKGTAY 611
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 85.0 bits (201), Expect = 3e-17
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
+V +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ ++ VIN+D P S++Y+H
Sbjct: 425 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
Query: 439 RIGRTGRSKSKGTSYAFW 492
RIGRTGR + G + +F+
Sbjct: 485 RIGRTGRCGNLGIATSFF 502
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 178
KE++ LA+D+L D YI + +G + S + NI Q + E EK + L EI ++
Sbjct: 343 KEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHS 397
Query: 179 GAKTIIFVETKRKAENISRNIRR 247
++FVETKR A ++ + R
Sbjct: 398 ENLVLVFVETKRGANELAYFLNR 420
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 85.0 bits (201), Expect = 3e-17
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
+V +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ ++ VIN+D P S++Y+H
Sbjct: 409 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
Query: 439 RIGRTGRSKSKGTSYAFW 492
RIGRTGR + G + +F+
Sbjct: 469 RIGRTGRCGNLGIATSFF 486
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 178
KE++ LA+D+L D YI + +G + S + NI Q + E EK + L EI ++
Sbjct: 327 KEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHS 381
Query: 179 GAKTIIFVETKRKAENISRNIRR 247
++FVETKR A ++ + R
Sbjct: 382 ENLVLVFVETKRGANELAYFLNR 404
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 85.0 bits (201), Expect = 3e-17
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIH 438
+V +HGD Q ER+ L F+ G+ ILVAT VAARGLD+ ++ VIN+D P S++Y+H
Sbjct: 406 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
Query: 439 RIGRTGRSKSKGTSYAFW 492
RIGRTGR + G + +F+
Sbjct: 466 RIGRTGRCGNLGIATSFF 483
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 178
KE++ LA+D+L D YI + +G + S + NI Q + E EK + L EI ++
Sbjct: 324 KEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHS 378
Query: 179 GAKTIIFVETKRKAENISRNIRR 247
++FVETKR A ++ + R
Sbjct: 379 ENLVLVFVETKRGANELAYFLNR 401
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 83.8 bits (198), Expect = 7e-17
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 205 NQEKS*EHI-KEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVD 381
NQ+K + + K ++ +HG K Q +R+ L KEG + ILVATDVA RG+DV
Sbjct: 581 NQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVK 640
Query: 382 GIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYP 498
+ V+N+D S EDY HRIGRTGR+ G + F P
Sbjct: 641 DVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTP 679
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 83.8 bits (198), Expect = 7e-17
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHR 441
V +HGD Q ER++ L F+ G A ILVAT VAARGLD+ +K VIN+D P+ ++Y+HR
Sbjct: 455 VTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHR 514
Query: 442 IGRTGRSKSKGTSYAFW 492
IGRTGR + G + +F+
Sbjct: 515 IGRTGRVGNVGLATSFF 531
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP 178
KE++ LA+D+L + Y+ + +G + S + NI+Q + +E EK + L LL G S
Sbjct: 372 KEIQLLAQDFLKENYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDATGDS--- 427
Query: 179 GAKTIIFVETKRKAENISRNIRR 247
+ T++FVETKR A +++ + R
Sbjct: 428 -SLTLVFVETKRGASDLAYYLNR 449
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 83.4 bits (197), Expect = 9e-17
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+HG K Q +R + F++ +LVATDVA++GLD GI+ VINFD P E+Y+HRIG
Sbjct: 471 IHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIG 530
Query: 448 RTGRSKSKGTSYAF 489
RTGRS KG + F
Sbjct: 531 RTGRSGRKGLATTF 544
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
++++ A+ L I +N+G +A+ N+LQ ++ + ENKL +L+ + Q+
Sbjct: 389 RKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVRS---ENKLVRVLECL---QKTS 441
Query: 182 AKTIIFVETKRKAENI 229
K +IF E K +NI
Sbjct: 442 PKVLIFAEKKVDVDNI 457
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+HG ++Q +R+ L + G ILVATD+A+RG+DV I V+N+D+P E+Y+HR+G
Sbjct: 368 LHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVG 427
Query: 448 RTGRSKSKGTSYAF-WY 495
RTGR+ KG + +F W+
Sbjct: 428 RTGRAGRKGEAMSFLWW 444
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 79.4 bits (187), Expect = 1e-15
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEH-QEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGL 372
FC +++ +H++ Q+ L A C+HGD++ +ER L FK+G LV +DV ARGL
Sbjct: 511 FCRTKQQC-DHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGL 569
Query: 373 DVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
DV G+ VI+ P+ Y+HRIGR GR++ G S
Sbjct: 570 DVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLS 605
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 241 QEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNS 420
+++ + AV +HG +Q++R L +FK ILV TDVAARGLD+ + VIN+D P+
Sbjct: 304 RQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQ 363
Query: 421 SEDYIHRIGRTGRSKSKG 474
S+DY+HR+GRT R+ G
Sbjct: 364 SKDYVHRVGRTARAGRSG 381
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 74.9 bits (176), Expect = 3e-14
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYP--NSSEDYI 435
+ MH + Q++RD L F+ G+ +VA++V ARGL++ G+ V+N+D P N ++Y+
Sbjct: 1030 ISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYV 1089
Query: 436 HRIGRTGRSKSKGTSYAF 489
+RIGRTGR+ GTS AF
Sbjct: 1090 NRIGRTGRAGFTGTSTAF 1107
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 74.9 bits (176), Expect = 3e-14
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYP--NSSEDYI 435
+ MH + Q++RD L F+ G+ +VA++V ARGL++ G+ V+N+D P N ++Y+
Sbjct: 1030 ISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYV 1089
Query: 436 HRIGRTGRSKSKGTSYAF 489
+RIGRTGR+ GTS AF
Sbjct: 1090 NRIGRTGRAGFTGTSTAF 1107
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 73.3 bits (172), Expect = 9e-14
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
M TQ +R E L +FK+ +LV+TD+A+RGLD++G++ VIN + P S + YIHR+G
Sbjct: 447 MQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVG 506
Query: 448 RTGRSKSKGTS 480
RT R+ G S
Sbjct: 507 RTARAGKAGRS 517
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
LP + + G Q++R E +F E +A++L+ATDVA+RGLD + I VI D P +DY
Sbjct: 347 LPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDY 406
Query: 433 IHRIGRTGRSKSKGTS 480
IHR+GR+ R G S
Sbjct: 407 IHRVGRSARMDDSGNS 422
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + ++ K+ EI +H Q R+ V + F++G LV +D+ RG+D
Sbjct: 286 FCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGID 345
Query: 376 VDGIK*VINFDYPNSSEDYIHRIGRTGR 459
+ + VINFD+P ++E Y+HRIGR+GR
Sbjct: 346 IQAVNVVINFDFPRNAETYLHRIGRSGR 373
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
++ K+ +ERDE + +F+ G +LV T++ RGLD+ + VIN+D P S YIHR+G
Sbjct: 405 INSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVG 464
Query: 448 RTGRSKSKGTSYAFWYPVKFRQAK 519
RTGR+ G + ++ + K
Sbjct: 465 RTGRAGKSGHAVTYFTDADMKYIK 488
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSED--- 429
A +HGD++Q R++++ FK R ++LV TD+ +RG+DV + VINFD P+ D
Sbjct: 673 AQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGA 732
Query: 430 --YIHRIGRTGRS--KSKGTSYAFWYPVKFRQA 516
+IHR GRTGR+ K G +F P R +
Sbjct: 733 DTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDS 765
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 70.5 bits (165), Expect = 7e-13
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYI 435
P++ +H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+
Sbjct: 309 PSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYL 368
Query: 436 HRIGRTGRSKSKGTSYAF 489
HR+ R GR +KG + F
Sbjct: 369 HRVARAGRFGTKGLAITF 386
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 70.5 bits (165), Expect = 7e-13
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYI 435
P++ +H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+
Sbjct: 301 PSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYL 360
Query: 436 HRIGRTGRSKSKGTSYAF 489
HR+ R GR +KG + F
Sbjct: 361 HRVARAGRFGTKGLAITF 378
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 70.5 bits (165), Expect = 7e-13
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Frame = +1
Query: 229 IKEHQEIW----LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*V 396
+K H E+ +P + +HG + QQ+R +QF + IL+ TDVAARGLD+ + +
Sbjct: 327 VKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWI 386
Query: 397 INFDYPNSSEDYIHRIGRTGR 459
+ +D + +YIHR+GRT R
Sbjct: 387 VQYDPTDEPREYIHRVGRTAR 407
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H Q++R + L +F E + ++L+ATDVAARGLD+ GI VI++ P E YIHR G
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 362
Query: 448 RTGRSKSKG 474
RT R+ +G
Sbjct: 363 RTARASHRG 371
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H Q++R + L +F E + ++L+ATDVAARGLD+ GI VI++ P E YIHR G
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 529
Query: 448 RTGRSKSKG 474
RT R+ +G
Sbjct: 530 RTARASHRG 538
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 60.1 bits (139), Expect = 9e-10
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 448 RTGRSKSKGTSYAF--WYPVKFRQA 516
R+ R+ G++ +F Y V+ QA
Sbjct: 427 RSARAGRFGSALSFVTQYDVELLQA 451
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 60.1 bits (139), Expect = 9e-10
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIG 447
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 448 RTGRSKSKGTSYAF--WYPVKFRQA 516
R+ R+ G++ +F Y V+ QA
Sbjct: 427 RSARAGRFGSALSFVTQYDVELLQA 451
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYI 435
P +HG + R + F + ++++TDV ARG+D+ I VI FD P S ++
Sbjct: 285 PLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFV 344
Query: 436 HRIGRTGRSKSKGTS 480
HR GRT R +G +
Sbjct: 345 HRAGRTARCGREGNA 359
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/99 (29%), Positives = 52/99 (52%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + + + ++ I + C HG+ ER++++ F +LV TD+ ARG++
Sbjct: 233 FCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 292
Query: 376 VDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFW 492
+ +IN+D + E+Y+ R GR G SKG +F+
Sbjct: 293 IRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFF 330
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 463 KSKGTS 480
+ G +
Sbjct: 354 GAHGAA 359
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 463 KSKGTS 480
+ G +
Sbjct: 354 GAHGAA 359
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +1
Query: 319 KEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYP 498
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 355 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 414
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +1
Query: 319 KEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFWYP 498
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 422 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 481
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYP----------- 414
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 485 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 544
Query: 415 ------NSSEDYIHRIGRTGRSKSKG 474
E Y+HRIGRTGR G
Sbjct: 545 VDGFTQPDCETYLHRIGRTGRFGKTG 570
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYP----------- 414
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 510 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 569
Query: 415 ------NSSEDYIHRIGRTGRSKSKG 474
E Y+HRIGRTGR G
Sbjct: 570 VDGFTQPDCETYLHRIGRTGRFGKTG 595
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYP----------- 414
+HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 894 LHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMV 953
Query: 415 ------NSSEDYIHRIGRTGRSKSKG 474
E Y+HRIGRTGR G
Sbjct: 954 VDGFTQPDCETYLHRIGRTGRFGKTG 979
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 54.4 bits (125), Expect = 5e-08
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +1
Query: 307 LYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTA 365
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 54.4 bits (125), Expect = 5e-08
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +1
Query: 307 LYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTA 365
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGR 450
H T+ +R++ F + + +VAT G+D ++ VI++ PN+ E Y IGR
Sbjct: 477 HAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGR 536
Query: 451 TGRSKSKGTSYAFWYP 498
GR S FW P
Sbjct: 537 AGRDGSPSICRVFWAP 552
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +1
Query: 289 QERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKS 468
+ R ++L +F + +L+ +DV ARG D++ + VIN++ P + ++HR GRTGR+
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQ 495
Query: 469 KG 474
G
Sbjct: 496 DG 497
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
++Q++ E L F +G ILV+T VA GLD+ VI ++Y + ++ R GR
Sbjct: 333 SKQKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGRARAR 392
Query: 463 KSK 471
SK
Sbjct: 393 NSK 395
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +1
Query: 280 KTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGR 459
+T QE+ L +F GR ++VAT V GLDV +I Y SS I + + GR
Sbjct: 811 QTSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIK--YNCSSGSAIQLVQQRGR 868
Query: 460 SKSKGT 477
+++K +
Sbjct: 869 ARAKNS 874
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 289 QERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKS 468
+ + EVL +F + L+AT V G+DV VI FD P Y+ GR R+ S
Sbjct: 440 KRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGS 499
Query: 469 K 471
+
Sbjct: 500 R 500
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 340 LVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
+V T++ ARG+DV +K I + + Y HRIGR GR G S
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKS 476
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 LVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKG 474
+V T++ +RG+DV +K I + Y+HRIGR GR G
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGG 472
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/105 (25%), Positives = 44/105 (41%)
Frame = +1
Query: 178 WCENNNFC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDV 357
+C + N C EK + +K H + A H +R + G+ ++VAT
Sbjct: 315 YCLSRNDC---EKVAKALKSHG---IKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVA 368
Query: 358 AARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFW 492
G+D ++ VI+ P S E+Y GR GR T ++
Sbjct: 369 FGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 413
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/105 (25%), Positives = 44/105 (41%)
Frame = +1
Query: 178 WCENNNFC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDV 357
+C + N C EK + +K H + A H +R + G+ ++VAT
Sbjct: 338 YCLSRNDC---EKVAKALKSHG---IKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVA 391
Query: 358 AARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFW 492
G+D ++ VI+ P S E+Y GR GR T ++
Sbjct: 392 FGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 436
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 223 EHIKEHQEI---WLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK* 393
EH+K + E+ W+ + +H + +E+D+V Q G +++T+VA + +DGI+
Sbjct: 328 EHLKNYAELTNGWI-ILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRF 386
Query: 394 VIN 402
VI+
Sbjct: 387 VID 389
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 35.5 bits (78), Expect = 0.023
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFDYPNSSEDY 432
+PA+ H +++R+EV ++ ++ AT G+D ++ VI++ + Y
Sbjct: 439 IPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNLAGY 498
Query: 433 IHRIGRTGR 459
GR GR
Sbjct: 499 YQEAGRAGR 507
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.054
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 340 LVATDVAARGLDVDGIK*VINFDYPNSSEDYIHRIGRTGRS 462
+V T++ ARG+DV +K I + + Y HRIGR S
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSIS 317
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK*VINFD--YPN--SSEDYIH 438
H T +ER+ + F+E ILVAT A G+++ + +I P+ +S +Y
Sbjct: 206 HAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQ 265
Query: 439 RIGRTGRS--KSKGTSY 483
+GR GR+ ++G +Y
Sbjct: 266 MVGRAGRTGHATRGETY 282
>U41559-2|AAC24261.1| 135|Caenorhabditis elegans Hypothetical
protein C26B2.7 protein.
Length = 135
Score = 30.3 bits (65), Expect = 0.87
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 270 HTNSWQPYLLMFLDMFSAFLLVSTKIIV 187
H N+W YL++ L F AF+ V +++++
Sbjct: 79 HRNTWMAYLIIILVGFGAFVTVKSQVVM 106
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 402 IYYLFDTINIKPSSCNISCYKNTSTTFLELIQNFISFLLSFIAMHTNSWQPYLLMFLDMF 223
+Y++ T +P+ C I CYKN + + ++ L A++ N YL+ F +F
Sbjct: 691 LYFIKGTAGGRPTEC-IECYKNIAKMSGRSVDEMLASDLQLCAVNDNRLFAYLVPF--VF 747
Query: 222 SAF 214
S F
Sbjct: 748 SQF 750
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 59 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP--GAKTIIFVETKRKAENIS 232
GS+QL A+H Q ++CQE++ + LL+E + E G I+ K A+ ++
Sbjct: 257 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLEQTFGGAQILLPHFKGLAQTLT 316
Query: 233 R 235
+
Sbjct: 317 Q 317
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 59 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP--GAKTIIFVETKRKAENIS 232
GS+QL A+H Q ++CQE++ + LL+E + E G I+ K A+ ++
Sbjct: 272 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLEQTFGGAQILLPHFKGLAQTLT 331
Query: 233 R 235
+
Sbjct: 332 Q 332
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -3
Query: 357 NISCYKNTSTTFLELIQNFISFLLSFIAMHTN 262
+IS +++ +++FL +QNF+ + L +AM N
Sbjct: 100 SISSWRHFASSFLFFLQNFVDYSLMLVAMTYN 131
>Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical
protein T04H1.8 protein.
Length = 524
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 247 IWLPAVCMHGDKTQQERDEVLYQFKEGRASIL----VATDVAARGLDVDGIK*VINFDYP 414
+WL A+C++G D ++Y + ++ + +A +AARG V I V +D
Sbjct: 7 VWLGALCIYGSAF----DILIYAPRMMQSHVYFTARIANVLAARGHKVTVIDNVFRYDVD 62
Query: 415 NSSEDYIHRI 444
N IH I
Sbjct: 63 NELSSDIHEI 72
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = -3
Query: 432 VILRRIWIIKIYYL--------FDTINIKPSSCNISCYKNTSTTFLELIQNFISFLLSFI 277
V +RRIW+ + Y+ F + + P SC + ++ + + +S+LL+ +
Sbjct: 438 VFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCIEYPWSYWIPSYSDDARFNLSYLLN-L 496
Query: 276 AMHTNSWQPYLLMFLDMFSAFLLVSTKIIVF 184
+++ +W P + D F LL S ++ VF
Sbjct: 497 SIYGVNW-PSAYLIGDFF-VLLLASCQLAVF 525
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 104 DICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGCQLFV 268
++ E++KEN+L Q+ G+S + + I+ +E E ++ +R+ + F+
Sbjct: 165 EVLTENKKENELRKCKQKDGESVDDFYQRILALENAVLTEESAKWVRKLALETFL 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,767,497
Number of Sequences: 27780
Number of extensions: 229979
Number of successful extensions: 852
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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