Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0359.Seq
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 38 0.006
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 38 0.006
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 2.7
Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical p... 28 4.8
Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 6.3
U88168-1|AAC24403.2| 376|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 6.3
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.3
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 8.3
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 27 8.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 8.3
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 27 8.3
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 27 8.3
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 CQMAHRSDVRAPFAADVVESSHE*EARSFE*NGRVVLSDLCSVLAV----GDTKNTNFFI 316
CQ+ + +R P+ + E H +GR + ++ C LA D K +F+
Sbjct: 410 CQLHNAPRLRHPYWLALNEKCHL--------DGRTLATEFCEQLAYLVRRYDRKEAGYFL 461
Query: 317 STLVTYVLTYHLGWVSTVS 373
S LVT +L +H+ WV++V+
Sbjct: 462 SNLVTALLMHHMSWVASVA 480
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 CQMAHRSDVRAPFAADVVESSHE*EARSFE*NGRVVLSDLCSVLAV----GDTKNTNFFI 316
CQ+ + +R P+ + E H +GR + ++ C LA D K +F+
Sbjct: 471 CQLHNAPRLRHPYWLALNEKCHL--------DGRTLATEFCEQLAYLVRRYDRKEAGYFL 522
Query: 317 STLVTYVLTYHLGWVSTVS 373
S LVT +L +H+ WV++V+
Sbjct: 523 SNLVTALLMHHMSWVASVA 541
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 217 LVTRFNHIGCKRGPYIRSVSHLAASSA-ARC 128
L+T N IG +R PY+ S + L +SSA RC
Sbjct: 263 LITNANLIGVRRDPYVTSNAMLRSSSAMPRC 293
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 217 LVTRFNHIGCKRGPYIRSVSHLAASSA-ARC 128
L+T N IG +R PY+ S + L +SSA RC
Sbjct: 263 LITNANLIGVRRDPYVTSNAMLRSSSAMPRC 293
>Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 429 VRTTFCGHSSMISAEILVFHLARSHYHSCATN-TQFVNRLLVI 554
V+ ++C ++ + E L F+++ S YH C N T + + LV+
Sbjct: 83 VKESYCSYAILSVPEGLPFNVSTSVYHLCHKNATIYTQKFLVV 125
>Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 429 VRTTFCGHSSMISAEILVFHLARSHYHSCATN-TQFVNRLLVI 554
V+ ++C ++ + E L F+++ S YH C N T + + LV+
Sbjct: 83 VKESYCSYAILSVPEGLPFNVSTSVYHLCHKNATIYTQKFLVV 125
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 318 LMKKFVFFVSPTANTEQRSDSTTRPFYSKLRASH-S*LDSTTSAANGARTSDL 163
L K ++ A QR T +P + +LR++H S + STTS + TS L
Sbjct: 664 LQKTVSMSLTRLAGHRQRFAWTAKPLFPELRSNHSSTISSTTSPMLSSSTSTL 716
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 318 LMKKFVFFVSPTANTEQRSDSTTRPFYSKLRASH-S*LDSTTSAANGARTSDL 163
L K ++ A QR T +P + +LR++H S + STTS + TS L
Sbjct: 664 LQKTVSMSLTRLAGHRQRFAWTAKPLFPELRSNHSSTISSTTSPMLSSSTSTL 716
>U88168-1|AAC24403.2| 376|Caenorhabditis elegans Hypothetical
protein K11H12.9 protein.
Length = 376
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 180 PRLQPMWLNLVTSEKPGASNKMAESCCPISVPYWP 284
PR P+WL L S P +S+ E PY P
Sbjct: 2 PRRNPLWLRLPGSSSPSSSSTTEELRLAALSPYSP 36
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +2
Query: 272 SVLAVGDTKNTNFFISTLVTYVLTYHLGWVSTVSPYDTEVHQTAATKSNDSKRPYNVLWA 451
S +A+G TK++ L Y TYH T+ PYD+E T+ + SK + +W
Sbjct: 6799 SQVAMG-TKSSGDIKEALEYYQNTYH-----TIIPYDSETGNTSPSYVRISKLIPSKIWQ 6852
Query: 452 QLNDLCGNIGFPPRALALSQLRD 520
+L L LALS D
Sbjct: 6853 KLVGLSKLYNTTMYNLALSVFCD 6875
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -2
Query: 312 KKFVFFVSPTANTEQRSDSTTR-PFYSKLRASHS*LDSTTSAANGARTSDL*AIWQRLRL 136
+KF F+++ ++++ +TT P +K+R S STT A T ++ +L
Sbjct: 116 QKFTFYLTTPMTPKKKTTTTTHAPLTTKMRESTPATHSTTERAVITTTVPTTTTTEKTKL 175
Query: 135 LDAKSTRRPRQSRPPVLQALTYTP 64
L T + + V+ T +P
Sbjct: 176 LSTTPTSTTTRRKGGVIIDTTTSP 199
>Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical
protein M05D6.2 protein.
Length = 451
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 461 DLCGNIGFPPRALALSQLRDQHPVRQQATSNFDLLHSMRRSQTN 592
DLC + P R + +++LR + V DLL M+ TN
Sbjct: 109 DLCSRLCSPARDVKVAELRTRTDVIDIFEGTMDLLELMKNDLTN 152
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = -2
Query: 435 YGRLESFDFVAAVWWTSVS*GLTVDTHPRWYVSTYVTSVLMKKFVFFVSPTANTEQRSDS 256
YG +S D ++ S+ V + P S T + + F + PTA+T + D+
Sbjct: 154 YGSQQSTDTRGTLYQDSIC--ACVGSFPTCLFSENDTCISNRPFWNYDPPTASTTEEIDT 211
Query: 255 TTRPFYSKLRASHS*LDSTTSAANGARTS 169
++ S S + ST ++ ART+
Sbjct: 212 SSSTSRSTSTPSSTEASSTVTSTTTARTT 240
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 413 SNDSKRPYNVLWAQLNDLCGNIGFPP 490
S +SKR N+ WAQ+ND GN P
Sbjct: 837 SEESKRRKNI-WAQMNDPSGNSTLTP 861
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = -2
Query: 435 YGRLESFDFVAAVWWTSVS*GLTVDTHPRWYVSTYVTSVLMKKFVFFVSPTANTEQRSDS 256
YG +S D ++ S+ V + P S T + + F + PTA+T + D+
Sbjct: 136 YGSQQSTDTRGTLYQDSIC--ACVGSFPTCLFSENDTCISNRPFWNYDPPTASTTEEIDT 193
Query: 255 TTRPFYSKLRASHS*LDSTTSAANGARTS 169
++ S S + ST ++ ART+
Sbjct: 194 SSSTSRSTSTPSSTEASSTVTSTTTARTT 222
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -2
Query: 522 WSRNCDSASARGGKPIFPQRSLSCAHRTLYGRLESFDFVAAVW 394
W ++CDS+ G ++ L +YG L F ++ VW
Sbjct: 659 WKKSCDSS---GSCSVYDTDELRVRLHVIYGCLRIFSLISDVW 698
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 103 LAGPSCRLCIE---QPKTLPNGSQI*CTGPVCSRC 198
++ PSCR+C+E + + LP Q C VC RC
Sbjct: 14 ISTPSCRICLEPFDEGQHLPKILQ--CAHTVCERC 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,131,493
Number of Sequences: 27780
Number of extensions: 354083
Number of successful extensions: 1156
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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