Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0357X.Seq
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127817-1|AAI27818.1|  283|Homo sapiens KIAA0574 protein protein.     29   8.0  
BC098419-1|AAH98419.1|  668|Homo sapiens TBC1D10B protein protein.     29   8.0  
BC093816-1|AAH93816.1|  533|Homo sapiens TBC1 domain family, mem...    29   8.0  
BC093814-1|AAH93814.1|  533|Homo sapiens TBC1 domain family, mem...    29   8.0  
BC072453-1|AAH72453.2|  533|Homo sapiens TBC1 domain family, mem...    29   8.0  
BC063112-1|AAH63112.1|  622|Homo sapiens TBC1D10B protein protein.     29   8.0  
BC050523-1|AAH50523.2|  385|Homo sapiens TBC1D10B protein protein.     29   8.0  
AL117408-1|CAB55908.1|  233|Homo sapiens hypothetical protein pr...    29   8.0  
AK023192-1|BAB14454.1|  533|Homo sapiens protein ( Homo sapiens ...    29   8.0  
AK002101-1|BAA92086.1|  289|Homo sapiens protein ( Homo sapiens ...    29   8.0  

>BC127817-1|AAI27818.1|  283|Homo sapiens KIAA0574 protein protein.
          Length = 283

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 433 EFPSLCPLVFCATVCRYLSSWPFLLHSERSSAAALRCDVCLDLALH*LPC 284
           + P +CP       C +L+     LH+ R  A   + D CL L L  LPC
Sbjct: 193 QVPGMCPAPPATPPCAHLAWQAMPLHTGRRVARTWKRD-CLRLCLGALPC 241


>BC098419-1|AAH98419.1|  668|Homo sapiens TBC1D10B protein protein.
          Length = 668

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 564 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 595


>BC093816-1|AAH93816.1|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 429 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 460


>BC093814-1|AAH93814.1|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 429 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 460


>BC072453-1|AAH72453.2|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 429 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 460


>BC063112-1|AAH63112.1|  622|Homo sapiens TBC1D10B protein protein.
          Length = 622

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 518 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 549


>BC050523-1|AAH50523.2|  385|Homo sapiens TBC1D10B protein protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 281 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 312


>AL117408-1|CAB55908.1|  233|Homo sapiens hypothetical protein
           protein.
          Length = 233

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 129 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 160


>AK023192-1|BAB14454.1|  533|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13130 fis, clone NT2RP3002972, weakly similar to
           Halocynthia roretzi mRNA for HrPET-1. ).
          Length = 533

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 429 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 460


>AK002101-1|BAA92086.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11239 fis, clone PLACE1008533. ).
          Length = 289

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 346 SVPSEGGKATMIGSDKQSRRIQGDTRKETREQ 441
           S+PS  G +T +GS K++R+ + + +K+ +E+
Sbjct: 185 SLPSPTGNSTPLGSSKETRKQEKERQKQEKER 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,974,192
Number of Sequences: 237096
Number of extensions: 1369577
Number of successful extensions: 6891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6891
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)