Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0350.Seq
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.6  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 119 REQRDQLERLRDELHRHKHKNDEAVAKAQE 208
           +E  +Q  R R+E  RHK +  E   K ++
Sbjct: 69  KEINEQARREREEQERHKQQQQEKQQKIEQ 98


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 119 REQRDQLERLRDELHRHKHKNDEAVAKAQE 208
           +E  +Q  R R+E  RHK +  E   K ++
Sbjct: 220 KEINEQARREREEQERHKQQQQEKQQKIEQ 249


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 119 REQRDQLERLRDELHRHKHKNDEAVAKAQE 208
           +E  +Q  R R+E  RHK +  E   K ++
Sbjct: 279 KEINEQARREREEQERHKQQQQEKQQKIEQ 308


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 498 LQQK*RQRNSDGRNNSPTNSGNS 566
           +Q++ ++  SD  NN+    GNS
Sbjct: 450 VQEEAKKEESDSNNNNNKEEGNS 472


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 435 LQSLVDKYKTIIYDTEGVL 491
           L+ L+ KYKT+ Y   G L
Sbjct: 165 LEMLLQKYKTVTYVMTGQL 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,504
Number of Sequences: 336
Number of extensions: 1461
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)