Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0350.Seq
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317 33 0.29
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 33 0.29
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 33 0.29
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 32 0.51
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 31 0.67
12_02_1034 - 25562214-25562280,25562661-25562794,25562990-255631... 31 1.2
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 31 1.2
08_01_0397 - 3509186-3510291,3510322-3512335 31 1.2
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449... 30 2.0
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528... 30 2.0
03_02_0310 + 7315185-7316820,7318332-7318879 30 2.0
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 29 2.7
11_04_0299 + 16127671-16128180,16128217-16128516 29 3.6
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 29 3.6
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 29 3.6
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 29 3.6
01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044... 29 3.6
08_02_1168 + 24853895-24854216,24854264-24854286,24856102-248561... 29 4.7
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905... 28 6.2
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 28 6.2
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 28 6.2
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 28 6.2
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485... 28 6.2
01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144... 28 6.2
12_02_0855 + 23703827-23704019,23704465-23704481,23705051-237052... 28 8.3
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 28 8.3
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 28 8.3
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 28 8.3
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 28 8.3
05_01_0146 - 953957-956278,956468-956786,957185-957213 28 8.3
04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916 28 8.3
03_05_0680 + 26682010-26682030,26682675-26682869,26684203-266844... 28 8.3
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 28 8.3
01_06_0710 + 31384519-31385493 28 8.3
>07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317
Length = 496
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +2
Query: 242 SACSAP-RPMTPXQTSPG*EPRRQP--RTIADSTEGLAAQGDREAGDSGHGAAL*RPTQG 412
+A +AP RP P + + PR QP R EG A+ GD G TQG
Sbjct: 34 AAANAPSRPPPPPRVAKS-LPREQPGGRGSGRGAEGSASASPVAVGDR-EGKKTSTATQG 91
Query: 413 TGRSERTPPKSRRQIQDDHIRHGGR 487
G + +P + ++ DH GGR
Sbjct: 92 GGHASSSPRRLGEKLARDHPGGGGR 116
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 401 PTQGTGRSERTPPKSRRQIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQRELDELRQ 580
P+ + TP R + Q R K A EE + + +K+RE+ E R+
Sbjct: 1084 PSSADISRKETPGVQRLKEQGSLRTEREREKDKEASRRLEETKERDKKFEKEREIAEERE 1143
Query: 581 R-TVSQMQKKIDSLQEELAQAKSAR--HNHTFADAERLAEE 694
R + + +++ + ++ LA ++ R H FA+A AE+
Sbjct: 1144 RKKLEEQEREREREKDRLAVERATREAHERAFAEARERAEK 1184
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 116 SREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSACSAPRPMTPXQT 283
SREQ+ +L+ L+ + + H+ + D + A + ++V+AVL S R P T
Sbjct: 38 SREQQMRLQLLQQQQNAHQQRRDPPLNAAMDALNSDVSAVLASKMMQDRMRNPNPT 93
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 122 EQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEV----AAVLRSACSAPRPMTPXQTSP 289
E++ Q + + E HR ++D A AK + Q AEV AA +A AP P+ P + P
Sbjct: 45 ERKKQRKEIDKERHRQSAESDAAAAKPK--QPAEVAPEAAAAAAAAPVAPPPVIPVVSGP 102
Query: 290 G 292
G
Sbjct: 103 G 103
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 92 ELESAQGSSREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSA 247
EL A+ E+ + ++ DEL R K DEA AK QE A+ A SA
Sbjct: 115 ELVKAKEELVEKEKERGKVLDELERAKRAADEANAKLQEALAAQSKAAEESA 166
>12_02_1034 -
25562214-25562280,25562661-25562794,25562990-25563109,
25563331-25563510,25563847-25564020,25564466-25564639,
25564734-25564827,25566088-25566242
Length = 365
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 494 PATAKVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEELA 634
P +V+ + +R Q +K+R LD R+ + K +DSL+ ELA
Sbjct: 154 PQNTEVSRKIKRLTQLAREKKRALDVENMRSNVDVAKNLDSLKTELA 200
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 533 AQQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARHNHTFADAERLAEE 694
A Q ++ L E ++ Q++K+I ++QE L K+A +A+ LAE+
Sbjct: 255 AAQQEEESLHLAETNKQKADQLRKEIATIQESLTHVKAATEQAHEEEAQILAEK 308
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/108 (22%), Positives = 50/108 (46%)
Frame = +2
Query: 356 DREAGDSGHGAAL*RPTQGTGRSERTPPKSRRQIQDDHIRHGGRVKPATAKVTTEEQRWA 535
DRE S H R + R +R + RR + + R + + + +E+ A
Sbjct: 33 DRERSSSRHHH---REDRDDDR-DRDRDRERRHREKERDREERKAREREEREKEKERERA 88
Query: 536 QQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARHNHTFADAE 679
++ ++ RE + R+R + +++ D ++ + +S+ H+H DAE
Sbjct: 89 RRREERDRE-ERSRRREAAAEEEEEDVDRDRKRRRRSSHHHHHHRDAE 135
>05_05_0239 -
23543592-23544293,23544482-23544634,23544737-23544922,
23544951-23545097,23545274-23545411,23545527-23545727
Length = 508
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Frame = +2
Query: 116 SREQRDQLERLRDELHRHKHKNDEAVAKAQ-ETQLAEVAAVLRSACSAPRPMTPXQTSPG 292
SRE+ QLE L KH DE + + Q ET LAE A + R +
Sbjct: 250 SRERCAQLEEENRMLRDGKHDADEDLIRQQLETLLAEKARLANENTVYARENRFLREIVE 309
Query: 293 *EPRRQPRTIADSTEGLAAQGDREAGDSGH 382
+ E +A GD E GD H
Sbjct: 310 FHQLNMQDVVDLDDEDMAGDGDGEEGDDDH 339
>04_03_1031 +
21850857-21851009,21852229-21852350,21852447-21852891,
21852981-21853087,21853192-21854524,21854632-21854859,
21854951-21855181,21855278-21855537,21855651-21856113
Length = 1113
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 503 AKVTTEEQRWAQQLADKQR---ELDELRQRTVSQMQKKIDSLQEELAQAKSARHNHTFAD 673
AK+ EQ+ LA Q +LDELRQ + ++ +I+ +EEL +R A+
Sbjct: 83 AKLQAAEQKRLSLLAKAQNRLAKLDELRQAAKNIVEMRIEKEREELGTRVESRVRQAEAN 142
Query: 674 AERL 685
RL
Sbjct: 143 RMRL 146
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 116 SREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAV 235
S E+RD+L L+ +L R E + +A TQL + A+
Sbjct: 311 SHEKRDELASLQRKLERRSDLTTETLGRANRTQLEILVAI 350
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 254 APRPMTPXQTSPG*EPRRQPRTIADSTEGLAAQGDREAG 370
AP+P TP QT P P +T +G A G+ G
Sbjct: 786 APKPQTPPQTPPTETPAGGAQTPEQQPQGAEAAGEASEG 824
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 140 ERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSACSAPRPMTPXQTSPG*EPRRQPRT 319
E+++ + KH N ++ + + V + P+P QT P P P
Sbjct: 744 EKIQQQDALPKHANPVLLSSDLKKKAETVDRFCKPIMMKPKPAPKPQTPPQTPPTETPAG 803
Query: 320 IADSTEGLAAQGDREAGDSGHGAA 391
A + E QG AG++ G A
Sbjct: 804 GAQTPE-QQPQGAEAAGEASEGGA 826
>11_04_0299 + 16127671-16128180,16128217-16128516
Length = 269
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 452 QIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADK---QRELDELRQRTVSQMQKKIDSLQ 622
Q++++H G + A++ ++ QQL D+ RE+ + Q + + Q+ + L+
Sbjct: 46 QLEEEHQAWGSEIDSLKAQLQVHGDQF-QQLLDQYNDHREMMDTLQEQLRESQEHVSQLE 104
Query: 623 EELAQA 640
EEL A
Sbjct: 105 EELRAA 110
>07_03_1731 -
29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 500 TAKVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEEL 631
T K T+E+ Q A + R+ + Q + ++KKI++L+E++
Sbjct: 849 TLKTVTDERDLLWQEAKQLRKTISIMQNETASLKKKIEALEEDI 892
>04_04_0605 + 26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 506 KVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARH 655
+V T E++W D ++ELD++ T ++ + +DS ++ H
Sbjct: 1068 RVDTNEEQWLVNNEDLRKELDDVDNLTEERLDEVLDSFLKDFEAGALEAH 1117
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 86 AHELESAQGSSREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSACSA 256
A ELE S +++D+L+R R E R + + D A ++ QL E L A A
Sbjct: 151 AIELEQTTIESTQRKDELQR-RLEATRRQQEADAAALRSMVAQLEEARLELADAIDA 206
>01_06_1593 +
38502884-38502993,38503580-38503665,38504352-38504497,
38504817-38504933,38505028-38505144,38505858-38506001,
38506099-38506251
Length = 290
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +2
Query: 425 ERTPPKSRRQIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQRELDELRQRTVSQMQK 604
+R PP S Q + + ++E +R+ +L ++++L Q V
Sbjct: 3 DRIPPPSPLQYSPSPVHSSPHPLSSLRYSSSERERYLAELLAERQKLAPFVQ--VLPFCT 60
Query: 605 KIDSLQEELAQAKSARHNHTFADAERL 685
++ L +E+ +A S NH F D ER+
Sbjct: 61 RL--LNQEILRASSLPPNHNFVDPERI 85
>08_02_1168 +
24853895-24854216,24854264-24854286,24856102-24856181,
24856286-24856369,24856843-24857074
Length = 246
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 242 SACSAPRPMTPXQTSPG*EPRRQPRTIADSTEGLAAQGDREAGDSGHGAAL 394
S+ +A RP P + G P P T + GL GD ++GD G +L
Sbjct: 62 SSAAAGRP-DPSLAAVG-RPDPSPATAGKTAAGLGQSGDDDSGDGDDGGSL 110
>05_03_0162 -
9050981-9051003,9051141-9052273,9052388-9053310,
9053560-9054615
Length = 1044
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 393 SDDRLKELADQNEHLQSLVDKYKTIIYDTEGVLSRLQQK*RQRNSDGRNNSPTN 554
+D + + DQ+ +Q V K K ++YD +L K QR G + P N
Sbjct: 49 ADAERRRITDQS--VQGWVRKLKDVMYDVTDILDLCHLKAMQRGGVGSSAPPVN 100
>04_03_0501 +
16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 28.3 bits (60), Expect = 6.2
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Frame = +2
Query: 101 SAQGSSREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSA-CSAPRPMTPX 277
S GSS + RDEL ++ + + AK + + AE+ LRS S P+P
Sbjct: 449 SRDGSSFGLTPKSTPFRDELRINEEVDMQDTAKLELRRQAELRKSLRSGFASIPQPKNEY 508
Query: 278 Q--TSPG*EPRRQ--PRTIADSTEGLAAQGDREAGDSGHGAAL*RPTQGTGRSERTPPKS 445
Q P E ++ I D ++ LA +R + A L + ++ RS PP +
Sbjct: 509 QIVMPPITEEEKEEAEEKIEDMSDRLAR--ERAEEQARQEALLRKRSKVLQRSLPRPPAA 566
Query: 446 RRQIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQ 556
+I + GG + + V A +L +++
Sbjct: 567 SIEILRQTLIKGGESRSRSTFVPPTSLEQADELINEE 603
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 521 EQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARHN 658
E++ + + KQR L E Q+T+ ++ + +LQ++L QA + N
Sbjct: 162 EEKVREMVEMKQRSLAEDSQKTLEALKDRERALQDQLRQATESVKN 207
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 ATAKVTTEEQRWA-QQLADKQRELDELRQRTVSQ-MQKKIDSLQE 625
AT + E R QQ+ +K RE+ E++QR++++ QK +++L++
Sbjct: 145 ATIRRLEERNRQLEQQMEEKVREMVEMKQRSLAEDSQKTLEALKD 189
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 407 QGTGRSERTPPKSRRQIQDDHIRHGGRVKPATAKVTTEEQ 526
+ TGR ER PPK +++ + G + A EE+
Sbjct: 55 RNTGRQERAPPKGTSSREEEEVNAGRQEHSAATGTHREEE 94
>01_05_0635 -
23847255-23847287,23847397-23848083,23848178-23848540,
23848633-23848725,23848820-23848870,23849031-23849304,
23849766-23850595
Length = 776
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 506 KVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARHN 658
+VT E A+ + + Q+E ELRQ+ Q QK + + LA S + +
Sbjct: 548 RVTDSETDQAKLVLELQKENSELRQQLARQQQKLLTVQAQTLASNASPQQS 598
>01_01_0171 +
1446221-1446902,1447040-1447221,1447339-1447409,
1447480-1447486,1447530-1447619,1447694-1447981,
1448121-1448333,1448860-1449087
Length = 586
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 449 RQIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQRELDEL 574
R++QD +RH R+ K+ ++ + Q L + +ELD+L
Sbjct: 230 RKMQDLALRHSQRIMDENKKLRSDLESKMQLLDSRSKELDKL 271
>12_02_0855 +
23703827-23704019,23704465-23704481,23705051-23705254,
23705486-23705605,23705867-23706472
Length = 379
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 128 RDQLERLRDELHRHKHKNDEAVAKAQETQLA--EVAAVLRSACSAPRPMTPXQ 280
RD LE LR+ + RH N EAV+ +T +A + + R C R + Q
Sbjct: 151 RDDLEPLRNYVFRHAIDNYEAVSVKPKTGMACLPLTSPARGICITSRALFEFQ 203
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +2
Query: 413 TGRSERTPPKSRRQI---QDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQRELDELRQR 583
TG S+ ++ Q+ +D+ + G A+A T +EQ +QL E E
Sbjct: 332 TGVSQCNDASTQLQLSIGRDEVMGAAGTSDEASAAATAKEQA-REQLRQAMAE-KEAAGE 389
Query: 584 TVSQMQKKIDSLQEELAQAKSARH 655
+Q +++++ ++ELA A+ RH
Sbjct: 390 ARAQARRQVELAEQELATARRMRH 413
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/115 (23%), Positives = 36/115 (31%)
Frame = +2
Query: 119 REQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSACSAPRPMTPXQTSPG*E 298
R RD E R H H E+ A RS+ APR + S E
Sbjct: 54 RHHRDDEEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADRE 113
Query: 299 PRRQPRTIADSTEGLAAQGDREAGDSGHGAAL*RPTQGTGRSERTPPKSRRQIQD 463
EG + D E G + P + E P + RR+ +D
Sbjct: 114 APPPSSRKRKGHEGGGNESDPEGGKRARASVEPPPPK-----EERPRRERRRFED 163
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +2
Query: 116 SREQRDQLERLRDELHRHKHKNDEAVAKAQETQLAEVAAVLRSACSAPRPMTPXQTSP 289
+ ++R+ +L +++H + + AK++ET+ AE+ + +S PM P
Sbjct: 243 AEKRREFYSKLEEKIHAQELEKSNMQAKSKETEEAELKKLRKSLNFRANPMPSFYKEP 300
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 351 KETEKQATVVTAPPSDDRLKELADQNEHLQSLVDKYKTIIYDTEGVLSRLQQK*RQRNSD 530
K A + +DD K++ NE+ + L D K+ T+G+ + L + RQ+N
Sbjct: 1023 KNATNSAFSIAQERNDDLTKKVEVANENFKQLKDTLKSFEESTKGLETSLMME-RQQNEA 1081
Query: 531 GR 536
R
Sbjct: 1082 NR 1083
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 524 QRWAQQLADKQR-ELDELRQRTVSQMQKKIDSLQEELAQAKSARHNHTFADAERL 685
+RWA++ + ++ DEL Q + + QK+ + Q E+ + R H AD E L
Sbjct: 178 KRWAEEATEIEKFRADELEQAGIDEAQKREEEWQREI---ECVRGQHA-ADLETL 228
>04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916
Length = 234
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = +2
Query: 299 PRRQPRTIAD-STEGLAAQGDREAGDSGHGAAL*RPTQGTGRSERTPPKSRRQIQDDHIR 475
PRR A TE AA GD G A R PP S + +D H R
Sbjct: 41 PRRAAAKDAKIGTETPAADGDAARKRPSAGDAPAPAPLADKRHRPNPPSSGSRDRDRHHR 100
Query: 476 HG-----GRVKPATA 505
HG G +P+TA
Sbjct: 101 HGHSHSHGHARPSTA 115
>03_05_0680 +
26682010-26682030,26682675-26682869,26684203-26684428,
26684602-26685221
Length = 353
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/67 (19%), Positives = 32/67 (47%)
Frame = +2
Query: 476 HGGRVKPATAKVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSLQEELAQAKSARH 655
+G + KP KV ++ ++W L K++ ++++ + ++Q QA+ H
Sbjct: 85 NGSQKKPVLGKVKSKAKKWMHLLHHKKKPQEDMQDPVQTAAAAMSTTMQTTDPQAQLDIH 144
Query: 656 NHTFADA 676
H+ ++
Sbjct: 145 PHSSCES 151
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 440 KSRRQIQDDHIRHGGRVKPATAKVTTEEQRWAQQLADKQRELDELRQRTVSQMQKKIDSL 619
K RQ+ D + ++ A V + Q Q DKQ EL++L Q ++K L
Sbjct: 533 KPDRQVSPDKLLRAALLRSRYADVIVKAQGILSQGGDKQEELEKL------QKEEKARLL 586
Query: 620 QEELAQAKSARHNHTFADAER 682
E A A AR A+A+R
Sbjct: 587 AEGNA-AMEARRAEAEAEAKR 606
>01_06_0710 + 31384519-31385493
Length = 324
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +2
Query: 107 QGSSREQRDQLERLRDELHRHKHKNDEA-------VAKAQETQLAEVAAVLRSACSAPRP 265
+ S QR++ +R ++E H+H+ + D+ ++ + L+++ A +A + P+P
Sbjct: 6 RSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKP 65
Query: 266 MTPXQTS 286
P S
Sbjct: 66 AAPADKS 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,422,310
Number of Sequences: 37544
Number of extensions: 231797
Number of successful extensions: 1464
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -