Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0349.Seq
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    32   0.64 
12_02_0483 + 19546295-19546397,19547163-19547482,19547606-195486...    30   2.6  
05_04_0308 - 20081366-20082404,20082702-20083078,20084293-200846...    30   2.6  
07_03_1532 - 27519701-27520831                                         29   3.4  
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036...    29   4.5  

>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -1

Query: 159 SHPCKEIYEPCCQIYVPVPQFVCPIIPRKNVMVIVKSFTKSKCICHATLSSFQ 1
           + PC+E   PC ++  P     CP+    N     K+  K  C C A + +F+
Sbjct: 571 AEPCEECNLPCQRVREPPCSHPCPLPCHLNDCPPCKALVKRPCHCGAMVHAFE 623


>12_02_0483 +
           19546295-19546397,19547163-19547482,19547606-19548611,
           19549890-19549985,19550500-19551551
          Length = 858

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -1

Query: 465 FDLKLIKKCISLNEYNKTQYKNYQQKLKVISKDKNYYNMIFR*PVFANIITLQNSSKK*Y 286
           F   LI+K IS+++++K+      + +   S     YN       +  ++ +QNS  K  
Sbjct: 597 FTKLLIQKIISIDDWDKSSNPYVARTIYSTSCANKRYNYWDYQKAWERVLLVQNSQMKHS 656

Query: 285 YAKKLFEDCFIQPIWSF 235
           +  +  E C   P+W F
Sbjct: 657 WFIRFKEGCEEIPLWFF 673


>05_04_0308 -
           20081366-20082404,20082702-20083078,20084293-20084679,
           20085038-20086000
          Length = 921

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -1

Query: 465 FDLKLIKKCISLNEYNKTQYKNYQQKLKVISKDKNYYNMIFR*PVFANIITLQNSSKK*Y 286
           F   LI+K IS+++++K+      + +   S     YN       +  ++ +QNS  K  
Sbjct: 692 FTKLLIQKIISIDDWDKSSNPYVARTIYSTSCANKRYNYWDYQKAWERVLLVQNSQMKHS 751

Query: 285 YAKKLFEDCFIQPIWSF 235
           +  +  E C   P+W F
Sbjct: 752 WFIRFKEGCEEIPLWFF 768


>07_03_1532 - 27519701-27520831
          Length = 376

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -1

Query: 465 FDLKLIKKCISLNEYNKTQYKNYQQKLKVISKDKNYYNMIFR*PVFANIITLQNSSKK*Y 286
           F   LI+K IS+++++K+      + +   S     YN       +  ++ +QNS  K  
Sbjct: 115 FTKLLIQKNISIDDWDKSSNPYVARTIYSTSCTNKRYNYWDYQKAWEKVLLVQNSQMKHS 174

Query: 285 YAKKLFEDCFIQPIWSF 235
           +  +  E C   P+W F
Sbjct: 175 WFIRFKEGCEEIPLWFF 191


>01_06_0986 -
           33602714-33602741,33603037-33603146,33603401-33603601,
           33604605-33604697,33604937-33605182,33606007-33606372,
           33606459-33606599,33607170-33607526
          Length = 513

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 12  SKWHGKCIYFW*RISQLPSRFSVGLSGRRIGGQVHKFDNKVHRFLCMD 155
           ++W G C Y     ++    F  G  G   GG +H   NK H + C+D
Sbjct: 87  AEWKGACFYD----NRAWMEFHNGTDGGLGGGTLHLETNKAHSWTCID 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,866,994
Number of Sequences: 37544
Number of extensions: 362056
Number of successful extensions: 707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)