Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0349.Seq
(828 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 79 3e-14
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 79 3e-14
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 79 3e-14
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 76 2e-13
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 73 1e-12
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 71 5e-12
AY823162-1|AAX24102.1| 1196|Homo sapiens cation-transporting P5-... 31 6.7
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 78.6 bits (185), Expect = 3e-14
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTG
Sbjct: 72 GEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTG 130
Query: 223 DGT 231
D +
Sbjct: 131 DSS 133
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 78.6 bits (185), Expect = 3e-14
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTG
Sbjct: 98 GEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTG 156
Query: 223 DGT 231
D +
Sbjct: 157 DSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 78.6 bits (185), Expect = 3e-14
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTG
Sbjct: 268 GEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTG 326
Query: 223 DGT 231
D +
Sbjct: 327 DSS 329
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 301 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 359
Query: 223 DGTYK 237
DG YK
Sbjct: 360 DGNYK 364
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-13
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/65 (55%), Positives = 40/65 (61%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN T FID+ A +G YD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEYR-WHINFNTFFIDWMAALGLTYDRKKVSKAAILARIKRTG 352
Query: 223 DGTYK 237
DG YK
Sbjct: 353 DGNYK 357
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 70.9 bits (166), Expect = 5e-12
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEGFHNYHH FP+DY A E +IN TT FID A +G AYD K S I R RTG
Sbjct: 294 GEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTG 352
Query: 223 DG 228
DG
Sbjct: 353 DG 354
>AY823162-1|AAX24102.1| 1196|Homo sapiens cation-transporting
P5-ATPase protein.
Length = 1196
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -2
Query: 275 SFLKTVSFNPFGRL*VPSPVLSALFSIILAEAV 177
++ K V F P GRL P +LSA+F+I+L+ A+
Sbjct: 953 AYPKLVPFRPAGRLISPPLLLSAIFNILLSLAM 985
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,107,771
Number of Sequences: 237096
Number of extensions: 2114892
Number of successful extensions: 3170
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3159
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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