Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0349.Seq
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 60 3e-09
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 54 9e-08
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 54 2e-07
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 54 2e-07
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 31 0.76
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 31 0.76
U28971-3|AAK68670.1| 319|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical... 30 1.8
AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical pr... 29 3.1
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEG HNYHH FP DYR E + ++N T IDF A +G YD KT +I+++ + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEG HNYHH FP DYR E + ++N T IDF A +G YD KT +I+++ + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEG HN+HH FP DYR E +Y N T ID A +G YD KTA II ++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASANIIEKRALRTG 222
GEG HN+HH FP DYR E +Y N T ID A +G YD KTA II ++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 16 SGMANAFT----FGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTA 183
S + N FT GEG HN+HH FP DYRA E Y N T ID A +G YD KT
Sbjct: 257 SAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTRVLIDTAAVLGLVYDRKTI 315
Query: 184 SANIIEKRALRTG 222
+ I ++ G
Sbjct: 316 ADEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 16 SGMANAFT----FGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTA 183
S + N FT GEG HN+HH FP DYRA E Y N T ID A +G YD KT
Sbjct: 257 SAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTRVLIDTAAVLGLVYDRKTI 315
Query: 184 SANIIEKRALRTG 222
+ I ++ G
Sbjct: 316 ADEFISRQVANHG 328
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 157 GWAYDLKTASANIIEKRALRTGDGTYKRPNGLNETVFKKLLCVISFF 297
G +YDL+ ++ I ++ RTG T K+ N NE ++ L ++ F
Sbjct: 291 GDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAIYFALYVILILF 337
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 157 GWAYDLKTASANIIEKRALRTGDGTYKRPNGLNETVFKKLLCVISFF 297
G +YDL+ ++ I ++ RTG T K+ N NE ++ L ++ F
Sbjct: 291 GDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAIYFALYVILILF 337
>U28971-3|AAK68670.1| 319|Caenorhabditis elegans Hypothetical
protein B0244.7 protein.
Length = 319
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 387 IFVGNFCIGFYCIHLNLYIFLLVLSQILKLI-IGYKRNITLSHKRVKFPSFVTVILLSKA 563
IF+ C+ F+ + LN+YIF +++ + K+ K+ I + + V + I L
Sbjct: 50 IFIIPCCMSFFALFLNIYIFYVLIPNLRKMNGRSKKKYIFILSRAVSASMSILAIFLLPV 109
Query: 564 FVYFI*YEF 590
++ + F
Sbjct: 110 IIFLTHFNF 118
>AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical
protein Y105C5B.19 protein.
Length = 484
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 LKATQSGMANAFTFGEG-FHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 177
L+A++ GM F ++Y P D + E + R +D++ W+ +A +
Sbjct: 188 LQASKHGMWLPIGFAASELYDYAKGEPLDRKTCEKNLEKLIKNDRDVDYYEWLNFAKRCR 247
Query: 178 TASANIIEKRAL 213
T + N++E+ AL
Sbjct: 248 TQNQNLMEEMAL 259
>AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical
protein F52D2.8b protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 447 KKCISLNEYNKTQYKNYQQKLKVISKDKNYYNMIFR*PVFANIITLQNSSK 295
KK I + + +T +K+ + LK +SK + YY + R VFA+ I S K
Sbjct: 95 KKQIKGDNFMETAFKDLKTSLKHVSKLEIYYCIPNRYDVFASFIDFLKSKK 145
>Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical
protein M199.2 protein.
Length = 488
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 LKATQSGMANAFTFGEG-FHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 177
L+AT+ GM F ++Y P D E + R +D++ W+ A +
Sbjct: 190 LQATKLGMWLPIGFAASELYDYEKGVPLDRETCEKNLEKLIKNDRDVDYYEWLNLAQQCR 249
Query: 178 TASANIIEKRAL 213
T + ++E+ AL
Sbjct: 250 TENHKLMEQMAL 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,722,401
Number of Sequences: 27780
Number of extensions: 372458
Number of successful extensions: 882
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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