Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0349.Seq
(828 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 27 0.28
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 0.65
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.85
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.85
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 1.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 1.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 4.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 4.6
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.0
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 8.0
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 26.6 bits (56), Expect = 0.28
Identities = 7/24 (29%), Positives = 18/24 (75%)
Frame = +2
Query: 392 CW*FLYWVLLYSFKLIHFFISFKS 463
CW +Y++++ ++ + +FF+S +S
Sbjct: 71 CWMNVYYIVILAWAIFYFFMSMRS 94
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.65
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMI 346
N Y + Y NY K YYN+I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY + K YYN+
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNI 113
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -1
Query: 456 KLIKKCISL-NEYN-KTQYKNYQQKLKVISKDKNYYNMI 346
K+I SL N YN Y NY K YYN+I
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNII 118
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNM 349
N YN + Y NY +K K YYN+
Sbjct: 87 NNYNYSNYNNYNNNYNNYNK-KLYYNI 112
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 429 NEYNKTQYKNYQQKLKVISKDKNYYNMIFR*PV 331
N YN Y NY +KL KNY I + PV
Sbjct: 331 NNYNNNNYNNYNKKLYY----KNYIINIEQIPV 359
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 456 KLIKKCISLNEYNKTQYKNYQQKL 385
K+I + +N YKNY +KL
Sbjct: 313 KIISSLSNKTIHNNNNYKNYNKKL 336
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 4.6
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = +2
Query: 392 CW*FLYWVLLYSFKLIHFFISFK 460
CW +Y++++ ++ L + +S +
Sbjct: 109 CWTNIYYIIILAWALFYLLVSLR 131
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 4.6
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = +2
Query: 392 CW*FLYWVLLYSFKLIHFFISFK 460
CW +Y++++ ++ L + +S +
Sbjct: 162 CWTNIYYIIILAWALFYLLVSLR 184
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 432 NLYIFLLVLSQILKLIIG 485
N Y+F L +S +L LI+G
Sbjct: 69 NYYLFNLAVSDLLFLILG 86
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 377 ITFNFCW*FLYWVLLYSFKLIHFFISFKSN 466
++FN W LY+ ++ K + FK+N
Sbjct: 1 MSFNIWWLILYFSIVCQAKAHYSLRDFKAN 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,020
Number of Sequences: 438
Number of extensions: 5111
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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