Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0348.Seq
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    25   2.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.4  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   4.5  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   4.5  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    24   4.5  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   6.0  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein
          S18 protein.
          Length = 46

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 77 RLIFVRFFKGMRRFYVVRVRGNHS 6
          RL  +   +GMR ++ +RVRG H+
Sbjct: 7  RLKRIHAHRGMRHYWGLRVRGQHT 30


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 266 TSRRLKWTRLECATVAIW--RRRGELQQY 186
           TSR L+W   +   V +W  R+ GE+  Y
Sbjct: 898 TSRYLRWAHRQVPDVRLWTGRKHGEVDFY 926



 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 227 WRTPNVSTLSD 259
           WR P+V+TLSD
Sbjct: 200 WRVPDVATLSD 210


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 314 REELRKVYLFVKILKPTSRRLKWTRLECATVAI 216
           REE   V +   +L+P     +W    C  VA+
Sbjct: 37  REEKADVLILSDVLRPPENNGRWAFSSCKAVAV 69


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = -2

Query: 222 CHLAATRGTTTIWTLKIF*NSAIYRWRSALLLCFNTTH 109
           C  AA       W +  F       WR  LL CF  TH
Sbjct: 573 CIFAAGVLQLPAWAIYTFLKRKEPDWRDRLLHCFKPTH 610


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = -2

Query: 222 CHLAATRGTTTIWTLKIF*NSAIYRWRSALLLCFNTTH 109
           C  AA       W +  F       WR  LL CF  TH
Sbjct: 573 CIFAAGVLQLPAWAIYTFLKRKEPDWRDRLLHCFKPTH 610


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 697 ITNFQRAFKNLFYLLYSNSEFTLS 768
           +T F+ A+   F+ L SNSEFT+S
Sbjct: 258 VTKFRTAY---FHALSSNSEFTVS 278


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 656 TIYLHLKIYKSYSL*QISNEHLKTYFIYCTV 748
           T Y HL +  S+ + Q+   +   Y IYC V
Sbjct: 282 TEYRHLWVDLSHMMQQLGKAYSNMYGIYCLV 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,888
Number of Sequences: 2352
Number of extensions: 14844
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)