Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0346.Seq
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   0.84 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   1.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   3.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.5  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 472 GSTMSRRAGTPTAKKVTQLVNVEEHVEGFR 383
           GST   +        V QL NVEEHV+ +R
Sbjct: 657 GSTTQAQTYKNALLSVQQLNNVEEHVKNYR 686


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 74  SASRRAISGLTPNTNKKFSTI*CRSRLSCATSLLLP 181
           SA   A SG++   + + +++ CRS L+  + L  P
Sbjct: 28  SAKMMASSGMSTRASARSASVDCRSSLASGSKLFAP 63



 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 61  CSMAFRVATGDFRTDAQHQQEIFDYLMSLAAFLRHFSPSAVKNTPRHGIISIS-PMVASR 237
           C+ A  +A+    T A  +    D   SLA+  + F+P      PR  +  I+ P VA++
Sbjct: 26  CTSAKMMASSGMSTRASARSASVDCRSSLASGSKLFAPEPRVALPRVSVTGINKPTVATK 85


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 122 SCWCWASVRKSP 87
           SCWCW   +K P
Sbjct: 521 SCWCWDLEKKFP 532


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 35   RRASLH*HGAPWPSASRRAISGLTPNTNK 121
            R A +   G+  PS   + + G  PNTNK
Sbjct: 1764 RAAKIAAFGSTGPSRMYQEVLGAVPNTNK 1792


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,294
Number of Sequences: 2352
Number of extensions: 10795
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)