Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0341.Seq
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 170 1e-44
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 170 1e-44
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 170 bits (414), Expect = 1e-44
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +3
Query: 255 AGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ 434
AGATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQ
Sbjct: 125 AGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 435 GIIIYRASYFGFYDTARGMLPDPKKHP 515
GIIIYRA+YFGFYDTARGMLPDPKK P
Sbjct: 185 GIIIYRAAYFGFYDTARGMLPDPKKTP 211
Score = 162 bits (393), Expect = 3e-42
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 180
VQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQ
Sbjct: 40 VQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQ 99
Query: 181 VFLGGVDKKTQFWRYFAGNLASGGA 255
VFLGGVDK TQF RYF GNLASGGA
Sbjct: 100 VFLGGVDKNTQFLRYFVGNLASGGA 124
Score = 138 bits (334), Expect = 5e-35
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +2
Query: 500 P*ETPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 679
P +TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KT
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266
Query: 680 EGTSAFFKGAFSNVLR 727
EG +AFFKGAFSN+LR
Sbjct: 267 EGGNAFFKGAFSNILR 282
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 530 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 703
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 704 GAFSNVLR 727
G +NV+R
Sbjct: 75 GNLANVIR 82
Score = 28.7 bits (61), Expect = 0.059
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 572 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 706
YP D R R+ G+A + + +C I K +G + ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 27.5 bits (58), Expect = 0.14
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 282 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 416
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 40 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 129
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 339 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 476
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 31 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 168
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 170 bits (414), Expect = 1e-44
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +3
Query: 255 AGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ 434
AGATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQ
Sbjct: 125 AGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 435 GIIIYRASYFGFYDTARGMLPDPKKHP 515
GIIIYRA+YFGFYDTARGMLPDPKK P
Sbjct: 185 GIIIYRAAYFGFYDTARGMLPDPKKTP 211
Score = 162 bits (393), Expect = 3e-42
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 180
VQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQ
Sbjct: 40 VQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQ 99
Query: 181 VFLGGVDKKTQFWRYFAGNLASGGA 255
VFLGGVDK TQF RYF GNLASGGA
Sbjct: 100 VFLGGVDKNTQFLRYFVGNLASGGA 124
Score = 138 bits (334), Expect = 5e-35
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +2
Query: 500 P*ETPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 679
P +TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KT
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266
Query: 680 EGTSAFFKGAFSNVLR 727
EG +AFFKGAFSN+LR
Sbjct: 267 EGGNAFFKGAFSNILR 282
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 530 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 703
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 704 GAFSNVLR 727
G +NV+R
Sbjct: 75 GNLANVIR 82
Score = 28.7 bits (61), Expect = 0.059
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 572 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 706
YP D R R+ G+A + + +C I K +G + ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 27.5 bits (58), Expect = 0.14
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 282 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 416
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 40 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 129
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 339 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 476
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 31 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 168
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,001
Number of Sequences: 438
Number of extensions: 4044
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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