Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0340.Seq
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.97 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 659 QQWMVFLYRISLLARPDCIIMRYELLSK 576
           Q ++ F Y++ L    D I+MRY+ L++
Sbjct: 156 QNYIHFFYQLLLYLITDMILMRYKELNR 183


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 249 GAPEPPLCASCTPSTSHVPVSPXMSVREMASVNSPVSETAS 371
           GAP P    S  P+      +P  S R + +  S V  TAS
Sbjct: 73  GAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTAS 113


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 32  PALQGYRRCLRPYP 73
           P +  YR C RPYP
Sbjct: 251 PYVPFYRYCYRPYP 264


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 415 FRCVRARYHHLPC 453
           + C   R HH+PC
Sbjct: 935 YMCEGERKHHMPC 947


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 32  PALQGYRRCLRPYPQGAGSPFILAW*LRQRHQVLPDPGAQLR 157
           P+L   R  L PYPQ   + ++ +  L Q +Q+     A +R
Sbjct: 27  PSLSDTRPML-PYPQNYINSYLFSLSLAQNNQLFTHHKAPIR 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 201 CQHRRGTPACTCP 163
           CQ + G  AC CP
Sbjct: 432 CQDKLGDYACYCP 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,027
Number of Sequences: 336
Number of extensions: 3290
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)