Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0340.Seq
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 45 5e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 45 5e-05
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 43 2e-04
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 43 3e-04
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 42 6e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 42 6e-04
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 40 0.002
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 38 0.006
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.013
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.039
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.039
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.068
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.12
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 32 0.37
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 32 0.37
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.64
SB_14488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_33933| Best HMM Match : T-box (HMM E-Value=0) 31 1.1
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 30 1.5
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 30 1.9
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.9
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.5
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 29 4.5
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_6257| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.9
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.9
SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) 28 7.9
SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06) 28 7.9
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 28 7.9
SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) 28 7.9
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 28 7.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 94.7 bits (225), Expect = 6e-20
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 430
GA SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S
Sbjct: 124 GAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISC 183
Query: 431 QGIIIYRASYFGFYDTARGML 493
GII+YR YFG YDT + +L
Sbjct: 184 VGIIVYRGFYFGLYDTLKPIL 204
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +3
Query: 30 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 209
D YKG++D R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F KKT
Sbjct: 50 DHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF---KPKKT 106
Query: 210 QFWRY-FAGNLASGGA 254
F+ N+ASGGA
Sbjct: 107 DSNAIKFSKNIASGGA 122
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 514 IVISWGIAQTVTTVAGIISYPFDNSS*RMMMQSGRAKSDILYKNTIHC 657
+VIS+ + VT AG+ SYP D RMMM SG A + YK +I C
Sbjct: 211 VVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEA---VKYKGSIDC 255
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 188
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 179
++KG++ ++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 70 KFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +2
Query: 263 TSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 442
T+ YPLD R RLA K +++GL N ++I++ +G+ YRG+ ++ GI+
Sbjct: 2 TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
Query: 443 IYRASYFGFYDTAR 484
Y F Y+T +
Sbjct: 57 PYAGISFFTYETCK 70
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 21 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVD 200
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F D
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAFGEFYD 78
Query: 201 --KKTQFWRYFAGNLA 242
K T F R G A
Sbjct: 79 GKKPTPFHRLAFGACA 94
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 260 ATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 439
AT VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984
Query: 440 IIYRASYFGFYDTARGMLPD 499
+A D RG+ D
Sbjct: 985 SPEKAIKLTTNDFVRGIFSD 1004
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +3
Query: 21 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 185
+ A++ YK +D F ++ + +G + +RG ++ P +A+ D + +F
Sbjct: 948 LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVSVQ 433
GA S YPLD R R+ DG + ++ N + ++K DG+ GLYRG ++
Sbjct: 183 GAVSQTIAYPLDVVRRRMQLAGAVPDGHK-YNTCINTLVNVYKDDGIRRGLYRGLSINYL 241
Query: 434 GIIIYRASYFGFYDTARGML 493
+ A FG Y+ + L
Sbjct: 242 RVCPQVAIMFGVYEVTKQFL 261
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
G T+ YPLD R+RLA V + G + CIS K G LY+GF ++
Sbjct: 75 GMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFVPTL-- 130
Query: 437 IIIYRASYFGFY 472
+ I A GFY
Sbjct: 131 LTIVPAMGIGFY 142
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 48 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQ 433
G + +PLD + RL G++ F+G +C K +++G GLY+G +
Sbjct: 37 GVCCIATGHPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPIT 96
Query: 434 GII-IYRASYFGFYDTARGMLPDPKNHP 514
G+ I+ ++GF + + DP P
Sbjct: 97 GVTPIFAICFWGFNMGKKLQMKDPNADP 124
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +3
Query: 18 QIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGV 197
Q ++ R+ GIV F + +E G+ S WRGN ANVI+ P + F +K K+ L G
Sbjct: 167 QASSTNRF-GIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGS 223
Query: 198 DKK 206
D K
Sbjct: 224 DTK 226
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
G S +YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ G
Sbjct: 241 GVASQTSIYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLG 295
Query: 437 IIIYRASYFGFYDTAR 484
II Y Y+T +
Sbjct: 296 IIPYAGIDLAVYETLK 311
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 251 CPGATSLC---FVYPLDFARTRLAXDVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
C A+S C YPL RTRL KG GQ + + + + KI DG GLYRG
Sbjct: 333 CGTASSTCGQLASYPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 188
+Y+G++ A I +++G+ SF+RG F +++ P ++ A + K +L
Sbjct: 265 QYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLKNFYL 315
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 9 VSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 158
V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 84 VLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 353 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNHPL*SAGA 532
GL + ++K +G+ ++G GVS + Y A + ++ L DP N L +G+
Sbjct: 96 GLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASLEDPHNGELSDSGS 155
Query: 533 SL 538
L
Sbjct: 156 ML 157
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVSVQ 433
GATS YPLD R R+ DG + +S N ++ DG+ GLYRG ++
Sbjct: 117 GATSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSINYL 175
Query: 434 GIIIYRASYFGFYDTARGML 493
+ A F Y+ + +L
Sbjct: 176 RVCPQVAVMFAVYEVVKQLL 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGFGVSVQ 433
G T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF +
Sbjct: 9 GLTACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF--TPT 63
Query: 434 GIIIYRASYFGFY 472
+ + A GFY
Sbjct: 64 SLSMIPAVGIGFY 76
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 344 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDT-ARGMLP 496
++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ +G+ P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 179
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
GA + YPLD R R+ + +G+G ++S + I +S+G IGL++G ++
Sbjct: 692 GAVAQSGTYPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLK 749
Query: 437 IIIYRASYFGFYDTARGML 493
+ F Y+ ++ +
Sbjct: 750 VAPTIGIQFAVYEVSKSAM 768
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
G +C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G
Sbjct: 51 GGLEICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYG 108
Query: 437 IIIYRASYFGFYDTARGMLPD 499
+ + F ++ + + D
Sbjct: 109 SVPKASVRFAVFEYLKNKMAD 129
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 24 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 203
AA Y+G +D + K G+L +RG + + P ++ FA + K K
Sbjct: 74 AAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFEYLKNKMADENGK 133
Query: 204 KTQFWRYFAGNLASG 248
TQF + A L +G
Sbjct: 134 LTQF-QTLASGLGAG 147
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
G T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 216 GMTASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 51 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 218
+DA ++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 218
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L +
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLSTKYFEDNIV 94
Query: 219 RYFAGNLASG 248
+F ++ SG
Sbjct: 95 CHFGASMISG 104
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 194
YKG +D RI + +G+ + W+G R P L F F ++ + F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +2
Query: 284 PLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 418
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +2
Query: 260 ATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 439
ATSLC YP + ARTRL + G++++ + + + +G GLY G G V
Sbjct: 945 ATSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQ 1002
Query: 440 IIYRASYFGFYDTARGMLPD 499
+ A F Y+ +L D
Sbjct: 1003 VPNTAIMFFTYEGVVYILRD 1022
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 344 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 493
+FSG+ + K++G+ L++G G ++ G+ RA YF Y + ML
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 338 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNH 511
Q ++G +C+ K+F S+GL G +RG ++ I A YFG + +L H
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGEH 351
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 347 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 466
++G+ +C +I K + ++GLY+G + G+ + A FG
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
G S YP+D ++ D G Q +++G +C+ KI+ S G+ +G
Sbjct: 368 GTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 146
+Y G D +I G+ +F +G A ++R FPT A
Sbjct: 399 KYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 418
G + C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 222 GFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRG 107
YK + AF +I K++G L W G
Sbjct: 153 YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ 433
G + + P+D + +L K + + G +C+ K+++S GL G ++G V+
Sbjct: 44 GLAQVPLIAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAV 103
Query: 434 GIIIYRASYFGFYD 475
I A YFG Y+
Sbjct: 104 RDIPGFAVYFGVYE 117
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 36 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 155
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 155
Y+G VD V++ + +GL ++GN +R P A+ F
Sbjct: 75 YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYF 113
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 347 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP-----DPKNH 511
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ AR L DPK H
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTH 91
Query: 512 PL*SAGA 532
+ A A
Sbjct: 92 VIAGATA 98
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 209
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +2
Query: 260 ATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 439
ATS PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 150 ATSFVLT-PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRD 206
Query: 440 IIYRASYFGFYDTARGMLPDPKNH 511
I + F + + KNH
Sbjct: 207 IPGWGAMFFTNELCHRAITGEKNH 230
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 69 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 299 RTRLAXDVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 421
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
G + +PLD R RL ++G+ + + +I +G+ GLY+G S+
Sbjct: 39 GVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVS 98
Query: 437 IIIYRASYFGFYD 475
I + YD
Sbjct: 99 IAPFLGVQQSVYD 111
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +2
Query: 251 CPGATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 430
C P+D +L G+GD + + G I + F G G Y+G+ S+
Sbjct: 114 CASIVGQTITVPVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASL 172
Query: 431 Q----GIIIYRASYFGFYDTARGMLPDPKNHPL*SAGAS 535
I+ ASY GFY G L H L G+S
Sbjct: 173 MTYAPSSAIWWASY-GFYTGVIGNLSADGTHRLLVLGSS 210
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 69 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 278 VYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 457
V PLD + R+ D +++ + N K DG+ GL RG+ + G +
Sbjct: 73 VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126
Query: 458 YFGFYDTARGM 490
FGFY+ + M
Sbjct: 127 KFGFYEVFKIM 137
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 362 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 448
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_14488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 360 PRPENSRWPSPLPTSXARRVRAKSRGYTKHREVAPGHHRRPDYQRSNARTA 208
P P +R P P P + + R +GYTK E+ + R P Q N R A
Sbjct: 70 PAPR-ARKPVPTPKTKIAQTRRALKGYTKSFEIGIKNSRDPLAQLQNTRKA 119
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 PLDFARTRL-AXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
PLD + RL A + K F G +C K + +GL GLY+G
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 155
+KG +D F++ + +GL ++G + ++ P+ AL F
Sbjct: 62 FKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTALTF 100
>SB_33933| Best HMM Match : T-box (HMM E-Value=0)
Length = 402
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 WRYFAGNLASGGAPEPPLCASCTPSTSHV-PVSPXMSVREM 335
W+Y G SGG PEPP TPS ++ P SP M
Sbjct: 102 WKYVNGEWVSGGKPEPP-----TPSCVYIHPDSPNFGAHWM 137
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +3
Query: 147 LNFAFKDKYKQVFLGGVDKKTQFWRYFAGNLASGGAPEPP---LCASCTPSTSHVPVSPX 317
++FA +D Y V+ G D F A + P PP AS TP + VSP
Sbjct: 519 ISFAHEDNYNNVYTLGTDPDFDFIS-TAPQTTASAFPTPPQTTASASPTPPQTTASVSP- 576
Query: 318 MSVREMASVN-SPVSETAS 371
S + ASV+ +P TAS
Sbjct: 577 TSPQTTASVSPTPPQTTAS 595
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWR 104
YKG+VD +R + +G+ SFWR
Sbjct: 54 YKGVVDCTMRTYRAEGIGSFWR 75
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 45 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +3
Query: 147 LNFAFKDKYKQVFLGGVDKKTQFWRYFAGNLASGGAPEPPLCASCTPSTSHVPVSPXMSV 326
+N + Q L G+ K T +W A + G P P CT VP +P ++
Sbjct: 556 MNVTVEPDASQFVLRGLTKFTAYWVQIAVFNSKGVGPRSPAVRRCT--DQDVPSAPPSNL 613
Query: 327 REMASVNSPV 356
R + ++ +
Sbjct: 614 RVLNQTSTSI 623
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 444 MMIPCTDTPKPLYRPIRPSDLKILLMQ 364
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 1704
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 408 YRPIRPSDLKILLMQFPRPENSRW-PSPLPTSXARRVRAKSRGYTKHREVAPGHHRR 241
Y P R S LL+ P E PSPL + AR V + K R+ PG +R
Sbjct: 1145 YSPDRVSPQGKLLLPSPVGEGKTLIPSPLMLAQAREVVSNGDNGNKRRKTPPGGSKR 1201
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 72 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 188
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_6257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 258 PGHHRRPDYQRSNARTASSCQHRRGTP 178
PG HRR Y ART C+ R TP
Sbjct: 423 PGVHRRKPYCSIKARTQGGCRGRVRTP 449
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 69 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 185
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -3
Query: 345 SRWPSPLPTSXARRVRAKSRGYTKHREVAPGHHRRPDYQRSN----ARTASSCQHRRGTP 178
+ W P T +K++ Y H + P R+N ++T ++C+H TP
Sbjct: 154 ANWYHPTKTQANWYHPSKTQAYLCHPTKTQANWNHPSKTRANWNHPSKTQANCRHPTKTP 213
Query: 177 ACTC 166
A C
Sbjct: 214 AYLC 217
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 69 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)
Length = 351
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 326 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 493
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R ++
Sbjct: 104 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 154
>SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06)
Length = 117
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 45 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY--KQVFLGGVDKKTQFW 218
G++ + V ++ + W G + +Y N+ +D V G+DKK Q W
Sbjct: 17 GLIQSQVTAIEQDKMGHLWMGTIGGLAKYDGHTFTNYTIRDGLLNNSVTALGIDKKNQIW 76
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 353 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 472
G C S + + G+ + GFG QG++++ + GFY
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128
>SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)
Length = 238
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 326 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 493
+G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R ++
Sbjct: 55 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 105
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +2
Query: 347 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 499
+ G+ + +FK++G+ +Y+G + + + + G YD + M D
Sbjct: 66 YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGD 116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,281,842
Number of Sequences: 59808
Number of extensions: 473552
Number of successful extensions: 1962
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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