Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0340.Seq
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 165 4e-43
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 165 4e-43
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 0.86
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 165 bits (400), Expect = 4e-43
Identities = 73/86 (84%), Positives = 80/86 (93%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
GATSLCFVYPLDFARTRLA DVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185
Query: 437 IIIYRASYFGFYDTARGMLPDPKNHP 514
IIIYRA+YFGFYDTARGMLPDPK P
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKTP 211
Score = 157 bits (380), Expect = 1e-40
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 QDVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
Q +SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQV
Sbjct: 41 QHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQV 100
Query: 183 FLGGVDKKTQFWRYFAGNLASGGA 254
FLGGVDK TQF RYF GNLASGGA
Sbjct: 101 FLGGVDKNTQFLRYFVGNLASGGA 124
Score = 93.5 bits (222), Expect = 2e-21
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +1
Query: 499 P*EPPIVISWGIAQTVTTVAGIISYPFDNSS*RMMMQSGRAKSDILYKNTIHCWA 663
P + P +ISWGIAQ VTTVAGI+SYPFD RMMMQSGRAKS+ILYK+T+HCWA
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA 261
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 281 YPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 128
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 338 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 475
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 22.6 bits (46), Expect = 3.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 6 DVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 167
DV K ++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 146 DVGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 165 bits (400), Expect = 4e-43
Identities = 73/86 (84%), Positives = 80/86 (93%)
Frame = +2
Query: 257 GATSLCFVYPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 436
GATSLCFVYPLDFARTRLA DVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185
Query: 437 IIIYRASYFGFYDTARGMLPDPKNHP 514
IIIYRA+YFGFYDTARGMLPDPK P
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKTP 211
Score = 157 bits (380), Expect = 1e-40
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 QDVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 182
Q +SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQV
Sbjct: 41 QHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQV 100
Query: 183 FLGGVDKKTQFWRYFAGNLASGGA 254
FLGGVDK TQF RYF GNLASGGA
Sbjct: 101 FLGGVDKNTQFLRYFVGNLASGGA 124
Score = 93.5 bits (222), Expect = 2e-21
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +1
Query: 499 P*EPPIVISWGIAQTVTTVAGIISYPFDNSS*RMMMQSGRAKSDILYKNTIHCWA 663
P + P +ISWGIAQ VTTVAGI+SYPFD RMMMQSGRAKS+ILYK+T+HCWA
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA 261
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 281 YPLDFARTRLAXDVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 415
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 39 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 128
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 338 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 475
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 22.6 bits (46), Expect = 3.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 6 DVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 167
DV K ++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 146 DVGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 24.6 bits (51), Expect = 0.86
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 555 DCGYGLSDAPADYNGWFLGS 496
DCG GL A +NGW++ +
Sbjct: 284 DCG-GLEFTAAPFNGWYMST 302
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -3
Query: 528 PADYNGWFL 502
PA+Y+GW+L
Sbjct: 202 PANYSGWYL 210
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -3
Query: 528 PADYNGWFL 502
PA+Y+GW+L
Sbjct: 202 PANYSGWYL 210
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 489 CCPTLRTTHCNQLGHRSDRN 548
C P R T+ N + H SD +
Sbjct: 212 CPPAPRLTNSNSIKHESDNS 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,125
Number of Sequences: 438
Number of extensions: 4208
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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