Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0339.Seq
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 151 8e-38
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 150 2e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 129 5e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 107 2e-24
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 97 3e-21
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 30 0.31
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 30 0.40
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.40
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 30 0.40
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.71
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.94
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.6
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.2
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 2.9
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 3.8
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.8
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 27 3.8
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.8
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 8.7
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 8.7
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 8.7
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 8.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 151 bits (367), Expect = 8e-38
Identities = 72/97 (74%), Positives = 83/97 (85%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G RA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKRRPSRPRMH 540
NDKGRLSKEEI+RMV+EAEKY+ ED+++ + + H
Sbjct: 503 NDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNH 539
Score = 94.7 bits (225), Expect = 1e-20
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +3
Query: 522 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHK 701
IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDK 593
Query: 702 QKELEGICNPIITKMY 749
QKELEG+ NPI+ K+Y
Sbjct: 594 QKELEGVANPIMAKIY 609
Score = 74.1 bits (174), Expect = 2e-14
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
SINPDE IL GD SE+ QD GIETAGGVMT LIKRN
Sbjct: 360 SINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIP 419
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
Y+DNQ GVLIQVFEG
Sbjct: 420 TKKSEVFSTYADNQPGVLIQVFEG 443
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 150 bits (363), Expect = 2e-37
Identities = 72/97 (74%), Positives = 82/97 (84%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G RA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKRRPSRPRMH 540
NDKGRLSKEEI+RMV EAEKY+ ED+++ + + H
Sbjct: 503 NDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNH 539
Score = 93.9 bits (223), Expect = 2e-20
Identities = 40/76 (52%), Positives = 58/76 (76%)
Frame = +3
Query: 522 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHK 701
IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAK 593
Query: 702 QKELEGICNPIITKMY 749
QKELE + NPI+ K+Y
Sbjct: 594 QKELESVANPIMAKIY 609
Score = 75.4 bits (177), Expect = 8e-15
Identities = 42/84 (50%), Positives = 44/84 (52%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
SINPDE +L GD SE+ QD GIETAGGVMT LIKRN
Sbjct: 360 SINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIP 419
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
YSDNQ GVLIQVFEG
Sbjct: 420 TKKSEIFSTYSDNQPGVLIQVFEG 443
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 129 bits (311), Expect = 5e-31
Identities = 60/86 (69%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITI 426
G R +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I
Sbjct: 472 GERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVI 531
Query: 427 TNDKGRLSKEEIERMVNEAEKYRNED 504
NDKGRLS+E+IERMV EAE++ ED
Sbjct: 532 KNDKGRLSEEDIERMVKEAEEFAEED 557
Score = 70.5 bits (165), Expect = 2e-13
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +3
Query: 513 KETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKE 686
KE I+A+N LE+Y +S+K +D E+L K+ DKQ +LD D +WL+ + A KE
Sbjct: 561 KERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKE 620
Query: 687 EYEHKQKELEGICNPIITKMY 749
E+E ++++L+ + +PI K+Y
Sbjct: 621 EFEDQRQKLDAVVHPITQKLY 641
Score = 47.2 bits (107), Expect = 2e-06
Identities = 30/83 (36%), Positives = 37/83 (44%)
Frame = +2
Query: 5 INPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXX 184
INPDE +L G++ + + GIET GGVMT LI RN
Sbjct: 392 INPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPT 449
Query: 185 XXXXXXXXYSDNQHGVLIQVFEG 253
DNQ+ VLIQV+EG
Sbjct: 450 RKSQIFSTAVDNQNTVLIQVYEG 472
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 107 bits (256), Expect = 2e-24
Identities = 49/89 (55%), Positives = 68/89 (76%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+
Sbjct: 486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVA 545
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKR 516
G L+ EIE MV +AEKYR D +++
Sbjct: 546 GSSG-LTDSEIEAMVADAEKYRASDMARK 573
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/84 (33%), Positives = 34/84 (40%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
S+NPDE +L G V+D GIET GGV T LI RN
Sbjct: 407 SVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIP 462
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
+D Q V I+VF+G
Sbjct: 463 TRKSQVFSTAADGQTAVEIRVFQG 486
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 96.7 bits (230), Expect = 3e-21
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +1
Query: 223 TRSTHPSI*GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 402
T T P G R +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Query: 403 NKENKITITNDKGRLSKEEIERMVNEAEKYRNED 504
+ I ITN G LS +I+ M+ A+K++ +D
Sbjct: 499 GRSAHIEITNSVGHLSSTKIQEMIENADKFKQQD 532
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 30.3 bits (65), Expect = 0.31
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 343 VTFDIDANGILNVSA---IEKSTNKENKITITNDKGR---LSKEEIERMVNEAEKYRNED 504
VT + D + LN + +E K+N I N + LSKEE R + EK ++
Sbjct: 49 VTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRL 108
Query: 505 DSKRRPSRPRMHWNLTASA 561
RRP HW+ T +A
Sbjct: 109 TIPRRP-----HWDQTTTA 122
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.40
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 483 REVQKRG*QQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKCNDTIK- 653
REV+K +++ET + KN + ++ ++ + KEK + K+T ++ N T
Sbjct: 212 REVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKTKPI 271
Query: 654 WLDSNQLADKEEYEHKQKEL 713
W + KEEY K L
Sbjct: 272 WTRNPSEVTKEEYASFYKSL 291
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 358 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 480
D LNVS + S +E +T ++ R+ +EE +RM ++
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASK 98
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.9 bits (64), Expect = 0.40
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 516 ETIQAKNALESYCFSMKSTMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKE 686
ET+ KNALE Y + ++ ++D + S + +L K D WL + + K
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKA 631
Query: 687 EYEHKQKELEGICNPI 734
Y K ++L + PI
Sbjct: 632 VYTAKLEDLMRVGGPI 647
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 436 KGRLSKEEIERMVNEAEKYRNEDD 507
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.94
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 591 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 716
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 373 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 504
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 366 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 470
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 168 TLPSPLNRLRHSPPTLITNTEYSSKYLR 251
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 403 NKENKITITNDKGRLSKEEIERMVNEAE 486
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 383 ETLRIPLASMSKVTSI*GTPRGAGGIP 303
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 466 RMVNEAEKYRNEDDSKRRPSRPRMHW 543
++ E K RNED KRRP R+++
Sbjct: 525 QLCEEERKKRNEDSWKRRPPAKRVNY 550
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 489 VQKRG*QQKETIQAKNALESYCFSMKST 572
V R K+TI KNA++ Y S+K T
Sbjct: 252 VSSRNKPNKQTILTKNAIQDYLVSLKIT 279
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 8.7
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 525 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 704
+A+ A + +E EK KEK D D++ DT+ D NQ+ +E E Q
Sbjct: 254 KAREARRRRSAQNSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQ 302
Query: 705 KELE 716
KE++
Sbjct: 303 KEVD 306
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 328 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 489
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 8.7
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -1
Query: 238 DEYSVLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 59
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 58 QDSSLDSCTISYGLVR 11
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 531 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 656
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 364 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 504
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,789,106
Number of Sequences: 5004
Number of extensions: 52845
Number of successful extensions: 265
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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