Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0339.Seq
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 160 1e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 8e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 150 1e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 129 3e-30
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 41 0.001
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.035
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 31 0.76
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 1.00
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 31 1.3
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 2.3
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 30 2.3
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 2.3
SB_33441| Best HMM Match : PDE6_gamma (HMM E-Value=6) 30 2.3
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 2.3
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 29 3.0
SB_7538| Best HMM Match : Neur_chan_memb (HMM E-Value=6e-24) 29 3.0
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 29 5.3
SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_1333| Best HMM Match : IncA (HMM E-Value=0.32) 29 5.3
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 28 7.0
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 28 7.0
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 160 bits (389), Expect = 1e-39
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R+MT NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA++KST KENKITIT
Sbjct: 447 GERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 506
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKR 516
NDKGRLSKE+IERMVNEA KY+ ED+ +R
Sbjct: 507 NDKGRLSKEDIERMVNEASKYKEEDEKQR 535
Score = 124 bits (300), Expect = 6e-29
Identities = 51/81 (62%), Positives = 71/81 (87%)
Frame = +3
Query: 507 QQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 686
+Q++ IQ KN+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC + +KWLD+NQ A+K+
Sbjct: 533 KQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKD 592
Query: 687 EYEHKQKELEGICNPIITKMY 749
E+E+ QKELE +CNPIITK+Y
Sbjct: 593 EFEYHQKELEKVCNPIITKLY 613
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
SINPDE ILHGDK + V+D GIETAGGVM+ LIKRN
Sbjct: 364 SINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIP 423
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
YSDNQ GVLIQVFEG
Sbjct: 424 TKQTQTFTTYSDNQPGVLIQVFEG 447
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 154 bits (373), Expect = 8e-38
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R++TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST KENKITIT
Sbjct: 539 GERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITIT 598
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKR 516
NDKGRLSKE+IERMV EAEK++ D++ R
Sbjct: 599 NDKGRLSKEDIERMVKEAEKFKAADEAVR 627
Score = 114 bits (275), Expect = 6e-26
Identities = 47/79 (59%), Positives = 66/79 (83%)
Frame = +3
Query: 513 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEY 692
+E IQ+KN+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+KEE
Sbjct: 627 RERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEI 686
Query: 693 EHKQKELEGICNPIITKMY 749
+ QKELEG+CNPIITK+Y
Sbjct: 687 DAHQKELEGVCNPIITKLY 705
Score = 75.4 bits (177), Expect = 5e-14
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
SINPDE ILHGDKSE QD G+ETAGGVMT IKRN
Sbjct: 456 SINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIP 515
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
YSDNQ VLIQV+EG
Sbjct: 516 TKQTQTFTTYSDNQTSVLIQVYEG 539
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 150 bits (363), Expect = 1e-36
Identities = 69/89 (77%), Positives = 81/89 (91%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R +TK NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K ITIT
Sbjct: 446 GERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITIT 505
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKR 516
NDKGRLSKEEI+RM+N+AEKY++ED+++R
Sbjct: 506 NDKGRLSKEEIDRMINDAEKYKSEDEAQR 534
Score = 89.8 bits (213), Expect = 2e-18
Identities = 36/80 (45%), Positives = 58/80 (72%)
Frame = +3
Query: 510 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEE 689
Q+E I A+N LESY F +KS + + L+ K+S SDK T+ +K + + WL+ N LA+KEE
Sbjct: 533 QREKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEE 592
Query: 690 YEHKQKELEGICNPIITKMY 749
+E ++KEL+ +C+PI+ K++
Sbjct: 593 FEEQEKELQRVCSPIMAKVH 612
Score = 68.1 bits (159), Expect = 7e-12
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
SINPDE IL GDKS+EV+D GIETAG VMT LI+RN
Sbjct: 363 SINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIP 422
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
YSDNQ V I+VFEG
Sbjct: 423 TKATQTFTTYSDNQPAVTIRVFEG 446
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 129 bits (311), Expect = 3e-30
Identities = 61/95 (64%), Positives = 73/95 (76%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R MTKDN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K T + KITIT
Sbjct: 1140 GERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITIT 1199
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKRRPSRPR 534
ND+ RL+ E+IERMVN+AEK+ +ED + R
Sbjct: 1200 NDQNRLTPEDIERMVNDAEKFADEDKKTKEKVEAR 1234
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +3
Query: 513 KETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEE 689
KE ++A+N LESY +S+K+ + D EKL K+S+ DK+TI + I W+D NQ A E+
Sbjct: 1228 KEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVED 1287
Query: 690 YEHKQKELEGICNP 731
++ ++++ + + +P
Sbjct: 1288 FKKEKRKWKMLYSP 1301
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/83 (37%), Positives = 37/83 (44%)
Frame = +2
Query: 5 INPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXX 184
INPDE +L G+ E+ + GIET GGVMT LI RN
Sbjct: 1060 INPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPT 1117
Query: 185 XXXXXXXXYSDNQHGVLIQVFEG 253
+DNQ+ V IQVFEG
Sbjct: 1118 KKSQVFSTAADNQNTVTIQVFEG 1140
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 113 bits (273), Expect = 1e-25
Identities = 55/89 (61%), Positives = 65/89 (73%)
Frame = +1
Query: 250 GWRAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 429
G R M DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T +E +I I
Sbjct: 251 GEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI- 309
Query: 430 NDKGRLSKEEIERMVNEAEKYRNEDDSKR 516
G LSK+ IE M+ EAEKY D K+
Sbjct: 310 QSSGGLSKDAIENMIKEAEKYAEADKQKK 338
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
++NPDE +L GD V+D GIET GGV T LI RN
Sbjct: 172 AVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIP 227
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
+D Q V I+VF+G
Sbjct: 228 TKKSQVFSTAADGQTQVEIKVFQG 251
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +2
Query: 2 SINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXX 181
++NPDE +L GD V+D GIET GGV T LI RN
Sbjct: 117 AVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIP 172
Query: 182 XXXXXXXXXYSDNQHGVLIQVFEG 253
+D Q V I+VF+G
Sbjct: 173 TKKSQVFSTAADGQTQVEIKVFQG 196
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 480 GREVQK-RG*QQKETIQAKNALESYCFSMKSTMEDEKLKEKIS-DSDKQTILDKCNDTIK 653
G+E K R + +AKNALES+ F ++ M E L EK+S +++++TI +
Sbjct: 702 GKEAPKARDDAKAANERAKNALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASD 760
Query: 654 WLDSN 668
WLD +
Sbjct: 761 WLDED 765
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 525 QAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSN-QLADKEEYEH 698
+A+ L++ S K T+ D +K + + D+ + C++ +WL++N A EE
Sbjct: 734 EAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRYCDEKSEWLENNADTASLEEIVK 793
Query: 699 KQKELEGICNPIITKM 746
++++L G+ PI++K+
Sbjct: 794 QKEDLAGVLQPILSKL 809
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/69 (21%), Positives = 37/69 (53%)
Frame = +3
Query: 345 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GREVQKRG*QQKETI 524
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q + + ++ Q++ QQ++ +
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQL 347
Query: 525 QAKNALESY 551
Q + + +
Sbjct: 348 QQQQQQQQH 356
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 561 MKSTMEDEKLKEKISDSDKQTILDKCNDTIKW-LDSNQLADKEEYEHKQKELEGICNPII 737
+++ + EK K + D +++ L + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQE--LSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 738 TKM 746
TKM
Sbjct: 157 TKM 159
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 486 EVQKRG*QQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 653
E + G QKE QA +E Y S++ E KE + S+K+ + ++C + IK
Sbjct: 14 ESTRAGDLQKEVTQASENIEKYSQSIRDLGE----KENVLTSEKKQLEEECQENIK 65
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Frame = +3
Query: 558 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN------QLADK-EEYEHKQKELE 716
S K ++ +K ++ D +K+ +++C TIK LDSN Q+AD+ EE + ++ELE
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELE 231
Query: 717 GI 722
+
Sbjct: 232 SV 233
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 391 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDSKRR 519
+K+ + NKI + N+ + SKE++ER V AE + DS+ +
Sbjct: 1031 DKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMK 1073
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 636 CNDTIKWLDSN-QLADKEEYEHKQKELEGICNPIITKM 746
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +3
Query: 513 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD------KCNDTIKWL--DSN 668
KE +Q + L ++ + K +E EK+ IS +D + +L+ K + I+ L + +
Sbjct: 299 KERLQIERKLANFTKTSKKEVESEKV---ISRTDGKKVLELEKDISKKKNEIRRLRTELS 355
Query: 669 QLADKEEYEHKQKELEG 719
QL + +++H +KELEG
Sbjct: 356 QLQENSKHKHFEKELEG 372
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +3
Query: 516 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYE 695
E + L+ + M + E E +KE + +++++ KC +T K LD+++ D+E+ E
Sbjct: 1059 EAVDEAKTLKESLYRMVN--EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-E 1115
Query: 696 HKQKELE 716
Q+E E
Sbjct: 1116 EVQREGE 1122
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 483 REVQKRG*QQKETIQAKNA-LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 659
RE ++ ++ E I +KN+ L + S +E+ +E +SDSD L K + + L
Sbjct: 1951 REKMRKANEEIEKILSKNSKLSDILNELNSGIENILNEETLSDSDPNVKLQKLREKFENL 2010
Query: 660 DSNQLADKEEYEHKQKE 710
+ KEE E +E
Sbjct: 2011 EKQVNNVKEEAEKNVQE 2027
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -1
Query: 178 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 44
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 370 ILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK-YRNEDDSKRRPSRPRM 537
IL + +E S NK+ + G+ S+E + V + + +DD K+ PS ++
Sbjct: 88 ILKATIVEASENKDAAGAVDKQSGQASEEWRQSRVRHFRRVWERDDDPKKSPSEKKL 144
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 334 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 501
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_33441| Best HMM Match : PDE6_gamma (HMM E-Value=6)
Length = 328
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 KSTNK--ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDSKRRPSRPRMHWNLTASA*S 567
KST++ E ++ + +K +LSK E +V + + ++ +DSKR S+ W ++ +
Sbjct: 20 KSTDEKQEEQLDLARNKSQLSKPTKENVVRYSSEEKSTNDSKRLSSK-SCAWEISLDGFT 78
Query: 568 LP 573
+P
Sbjct: 79 VP 80
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 334 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 501
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 564 KSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 713
K T ED++ ++K ++SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_7538| Best HMM Match : Neur_chan_memb (HMM E-Value=6e-24)
Length = 358
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 313 PAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 492
P P + ++ ++ + NV+ + N I NDKGR+ + + RM N + Y
Sbjct: 220 PVPEMNSRYDLPVTMETVSMDNVN-YNSARNSRCNIRRVNDKGRIKRFKARRMRNASNGY 278
Query: 493 RNEDDSKRRPSR 528
+ S + SR
Sbjct: 279 SSNQGSSQARSR 290
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +3
Query: 315 GAAWRASN*GHLRHRCQRYPQR-FRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GREV 491
G + A + H R P +RE + E D H +RQ L+ RD + + +
Sbjct: 251 GVGFAADDSDHAHDEEHRDPDSDAEWREHMIRFEGDDHPERQDHRLRRRDTPHYLKDKRI 310
Query: 492 QKRG*QQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 617
Q +G E ++ K L EDEK +EK + K
Sbjct: 311 QLKG---DEEVKVKELLAKAGTKGSEDEEDEKEQEKDDEGPK 349
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/94 (23%), Positives = 43/94 (45%)
Frame = +3
Query: 363 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GREVQKRG*QQKETIQAKNAL 542
QR QR R R+ H+Q ++ QRQR + R R R+ Q++ +Q++ Q +
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQRQR---QRQRQRQRQRQRQR-QRQRLR 91
Query: 543 ESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 644
+ + ++ + +D+D + D +D
Sbjct: 92 QRQRLRQRQRQRQQQRNDNDNDNDNRNDNDHDHD 125
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 558 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 704
S++ ++ E+ EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1684 SVREALDSER--EKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_28298| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 225
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 280 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 459
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 106 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 165
Query: 460 IERMVNEAEKYR 495
++ E E+Y+
Sbjct: 166 FRLILQEQERYK 177
>SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/115 (18%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 375 QRFRYREVHQQGEQD-HHYQRQRSSLQGRDRAYG**GREVQKRG*QQKETIQAKNALESY 551
Q + +EV ++ +Q+ Q+Q + + + +EVQK Q+++ Q + E
Sbjct: 36 QEEQKQEVQEEQKQEVQEEQKQEVQEEQKQKVQEEQKQEVQKEQKQEEQEEQKQEVQEEQ 95
Query: 552 CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 710
+ + E+ K+++ + KQ ++ ++ ++ + K+E + +QK+
Sbjct: 96 KQEEQEEQKQEEQKQEVQEEQKQEEQEEQKQEVQEEQKQEVQEEQKQEVQEEQKQ 150
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 334 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDSK 513
++E ++ I + + K +E K K + KEE R E EK R E++ K
Sbjct: 164 EVEKQKRLEEERIRSQNEERKRREREQKEREKQQKLDMEKEERRRRQQEEEKKRREEEEK 223
Query: 514 RR 519
R+
Sbjct: 224 RK 225
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 357 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 461
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 28.7 bits (61), Expect = 5.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 531 WPGWSPFAVILVSVLLCLI 475
WPGW P ++ +S+L+ L+
Sbjct: 277 WPGWIPGLILTISILILLL 295
>SB_1333| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 302
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 280 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 459
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 183 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 242
Query: 460 IERMVNEAEKYR 495
++ E E+Y+
Sbjct: 243 FRLILQEQERYK 254
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 486 EVQKRG*QQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDS 665
E +K G +KE + K E+ + E +K EK + KQ +K +T K ++
Sbjct: 12 ETEKEGETEKEA-ETKKEAET---EKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAET 67
Query: 666 NQLADKEEYEHKQKELE 716
+ A+KE+ + +KE E
Sbjct: 68 EKEAEKEKKKKTEKEEE 84
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 457 EIERMVNEAEKYRNEDDSKRRPSRPRM 537
+I R + E E+ NED+ +R SRPR+
Sbjct: 328 DILRPIPETEEDDNEDEQAKRESRPRL 354
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/42 (26%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 403 NKENKITITNDKGRLSKEEIERM--VNEAEKYRNEDDSKRRP 522
+KE + + D+ + S+++ E+ +N+ + R+ DD ++RP
Sbjct: 399 DKEKRPDVNKDESQRSRDDKEKRPDINKDDSQRSRDDKEKRP 440
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 576 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 710
EDE+ E SD D +T +++ +D ++ D+EE HK +E
Sbjct: 118 EDEEKTESESDDDDKTEKYSDDESDVSMDGDESDDEEEGPHKPEE 162
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 516 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEY- 692
E + + + SY K + EK KEK + +K+ ILD K++ N + E+
Sbjct: 1089 EILSPRKDIGSYKSCPKLRKKREKEKEKDKEKEKEVILD-FEALDKFIGRNPMTQIAEFR 1147
Query: 693 EHKQKELEGI 722
E + ELE I
Sbjct: 1148 EAEAAELEAI 1157
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 534 NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 710
+AL+ Y + ++ EKLKE I D K +LD+ ++W+ + ++ + ++KE
Sbjct: 852 SALDLYVLIPPANIK-EKLKEDIHDPHK--VLDRVKYRVEWVKHQEKEKQKLEDEREKE 907
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 385 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEK 489
A +K+T+K + ITN G++ KEE +R V E++K
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQK 1168
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 324 WRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 452
WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 246 WRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,165,008
Number of Sequences: 59808
Number of extensions: 474782
Number of successful extensions: 2010
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1985
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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