Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0335.Seq
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 121 5e-28
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 121 5e-28
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 121 5e-28
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 120 9e-28
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 120 9e-28
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 118 5e-27
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 118 5e-27
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 111 4e-25
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 30 1.6
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 29 4.8
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical p... 28 6.4
AC024876-10|AAP31418.1| 193|Caenorhabditis elegans Hypothetical... 28 8.4
AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical ... 28 8.4
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 121 bits (292), Expect = 5e-28
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+L+ LR E+ EKVIK VI N++
Sbjct: 195 TQHSPDISLDDLRKELIEKVIKAVIPANLI 224
Score = 111 bits (268), Expect = 4e-25
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 220 PANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 279
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVK+G
Sbjct: 280 RSAAYAARWVAKSLVKSG 297
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+
Sbjct: 305 QVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAE 364
Query: 689 YGHFGRAGFPWEIPKPLIVE 748
GHFG FPWE P+ L ++
Sbjct: 365 NGHFGHNEFPWEQPRHLQID 384
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 121 bits (292), Expect = 5e-28
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 84 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 143
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+L+ LR E+ EKVIK VI N++
Sbjct: 144 TQHSPDISLDDLRKELIEKVIKAVIPANLI 173
Score = 113 bits (271), Expect = 2e-25
Identities = 53/78 (67%), Positives = 58/78 (74%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 169 PANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 228
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVKAG
Sbjct: 229 RSAAYAARWVAKSLVKAG 246
Score = 102 bits (245), Expect = 2e-22
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY+ T+
Sbjct: 254 QVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAE 313
Query: 689 YGHFGRAGFPWEIPKPL 739
GHFG FPWE P+ L
Sbjct: 314 NGHFGHNNFPWEQPRNL 330
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 121 bits (292), Expect = 5e-28
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVIS 194
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+L+ LR E+ EKVIK VI N++
Sbjct: 195 TQHSPDISLDDLRKELIEKVIKAVIPANLI 224
Score = 113 bits (271), Expect = 2e-25
Identities = 53/78 (67%), Positives = 58/78 (74%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 220 PANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 279
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVKAG
Sbjct: 280 RSAAYAARWVAKSLVKAG 297
Score = 102 bits (245), Expect = 2e-22
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY+ T+
Sbjct: 305 QVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAE 364
Query: 689 YGHFGRAGFPWEIPKPL 739
GHFG FPWE P+ L
Sbjct: 365 NGHFGHNNFPWEQPRNL 381
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 120 bits (290), Expect = 9e-28
Identities = 59/90 (65%), Positives = 69/90 (76%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 84 EEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 143
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+LE LR E+ EKVIK VI N++
Sbjct: 144 TQHSPDISLEDLRKELIEKVIKVVIPGNLI 173
Score = 108 bits (260), Expect = 4e-24
Identities = 51/78 (65%), Positives = 55/78 (70%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
P +D TV H+NPCG F++GGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 169 PGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 228
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVKAG
Sbjct: 229 RSAAYAARWVAKSLVKAG 246
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY+ T+
Sbjct: 254 QVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAE 313
Query: 689 YGHFGRAGFPWEIPKPLIVE 748
GHFG FPWE + L ++
Sbjct: 314 NGHFGHNDFPWEQARKLKID 333
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 120 bits (290), Expect = 9e-28
Identities = 59/90 (65%), Positives = 69/90 (76%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S
Sbjct: 135 EEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVIS 194
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+LE LR E+ EKVIK VI N++
Sbjct: 195 TQHSPDISLEDLRKELIEKVIKVVIPGNLI 224
Score = 108 bits (260), Expect = 4e-24
Identities = 51/78 (65%), Positives = 55/78 (70%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
P +D TV H+NPCG F++GGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 220 PGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 279
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVKAG
Sbjct: 280 RSAAYAARWVAKSLVKAG 297
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY+ T+
Sbjct: 305 QVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAE 364
Query: 689 YGHFGRAGFPWEIPKPLIVE 748
GHFG FPWE + L ++
Sbjct: 365 NGHFGHNDFPWEQARKLKID 384
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 118 bits (284), Expect = 5e-27
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 94 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 153
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+L+ LR E+ KVIK VI N++
Sbjct: 154 TQHSPDISLDDLRKELIVKVIKAVIPANLI 183
Score = 111 bits (268), Expect = 4e-25
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 179 PANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 238
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVK+G
Sbjct: 239 RSAAYAARWVAKSLVKSG 256
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+
Sbjct: 264 QVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAE 323
Query: 689 YGHFGRAGFPWEIPKPLIVE 748
GHFG FPWE P+ L ++
Sbjct: 324 NGHFGHNEFPWEQPRHLQID 343
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 118 bits (284), Expect = 5e-27
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S
Sbjct: 76 EEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVIS 135
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS I+L+ LR E+ KVIK VI N++
Sbjct: 136 TQHSPDISLDDLRKELIVKVIKAVIPANLI 165
Score = 111 bits (268), Expect = 4e-25
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA +D++T+ H+NPCG FIIGGP DAGLTGRKIIVDTY KD TKVD
Sbjct: 161 PANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 220
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVAKSLVK+G
Sbjct: 221 RSAAYAARWVAKSLVKSG 238
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +2
Query: 509 QVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTST 688
QV+YAI VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+
Sbjct: 246 QVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAE 305
Query: 689 YGHFGRAGFPWEIPKPLIVE 748
GHFG FPWE P+ L ++
Sbjct: 306 NGHFGHNEFPWEQPRHLQID 325
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 111 bits (268), Expect = 4e-25
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = +3
Query: 255 PAQYLDERTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVD 434
PA LDE TV HINPCG FI+GGP DAG+TGRKIIVDTY KD TKVD
Sbjct: 219 PASLLDESTVFHINPCGTFIVGGPMGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDPTKVD 278
Query: 435 RSAAYAARWVAKSLVKAG 488
RSAAYAARWVA SLVKAG
Sbjct: 279 RSAAYAARWVATSLVKAG 296
Score = 110 bits (264), Expect = 1e-24
Identities = 53/90 (58%), Positives = 67/90 (74%)
Frame = +1
Query: 1 EECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVS 180
EE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT+P RVHTVVVS
Sbjct: 134 EETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVS 193
Query: 181 LQHSEKITLETLRDEIREKVIKEVILHNIL 270
QHS +TLE LR+ I VIK+VI ++L
Sbjct: 194 TQHSPDVTLEKLRETILADVIKKVIPASLL 223
Score = 99.5 bits (237), Expect = 2e-21
Identities = 43/87 (49%), Positives = 64/87 (73%)
Frame = +2
Query: 479 QGGLVPVLHGQVAYAISVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNL 658
+ GL + Q++YAI +A+P+S+ V+ +GTS T ++L IV+ +FDL PGKI+KEL+L
Sbjct: 294 KAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDL 353
Query: 659 RAPIYQRTSTYGHFGRAGFPWEIPKPL 739
+ PIY++T+ GHFG + FPWE PK L
Sbjct: 354 KRPIYEKTAENGHFGHSEFPWEQPKAL 380
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 518 KQPDHAAPAQARLDERLGDPSGGVCCGAVDLGEVLARES 402
K PD P RL E+L DP GV AV++ LAR++
Sbjct: 176 KYPDALRPTFPRLKEKLEDPDPGVQSSAVNVICELARKN 214
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 107 HRLLANMYLLVVQQSHREFIL*SC 178
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = -3
Query: 571 SAIIKDCNR*WLSYTNSISNLTMQHRHKPALTSDLATHRAAYAAER 434
+++++D + ++++ +SN H H + + ATH AYA +
Sbjct: 853 ASVVQDSHDESRAHSHMLSNTVQTHTHSQLINQNQATHYDAYATSQ 898
>Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical
protein F32H2.10 protein.
Length = 171
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 530 VAEPLSITVFDYGTSH-KTQQQLLSIVQK 613
+++PLS +F+Y SH ++LL I+QK
Sbjct: 26 ISDPLSKQIFEYEQSHTPNDRELLEIIQK 54
>AC024876-10|AAP31418.1| 193|Caenorhabditis elegans Hypothetical
protein Y94H6A.9b protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 452 RPMGRQVARQGGLVPVLHGQVAYAISVAEPLSITVFDYGTSHKTQQQL--LSIVQKNFDL 625
+P G R G +VP + GQ + + + A S T D+ H + + L +K
Sbjct: 50 KPFGGSGVRLGNVVPTVLGQSSSSATTAGTSSATT-DHNPDHTAENEAKQLEDAKKELST 108
Query: 626 RPGKIVKELNLRAPIYQR 679
+ + +R P QR
Sbjct: 109 NMNEPTTNIQIRLPNNQR 126
>AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical
protein Y94H6A.9a protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 452 RPMGRQVARQGGLVPVLHGQVAYAISVAEPLSITVFDYGTSHKTQQQL--LSIVQKNFDL 625
+P G R G +VP + GQ + + + A S T D+ H + + L +K
Sbjct: 158 KPFGGSGVRLGNVVPTVLGQSSSSATTAGTSSATT-DHNPDHTAENEAKQLEDAKKELST 216
Query: 626 RPGKIVKELNLRAPIYQR 679
+ + +R P QR
Sbjct: 217 NMNEPTTNIQIRLPNNQR 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,146,792
Number of Sequences: 27780
Number of extensions: 382097
Number of successful extensions: 1082
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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