Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0330.Seq
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 149 2e-36
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 149 3e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 99 2e-21
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 74 1e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 74 1e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 60 3e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 3.1
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.1
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 7.2
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 28 7.2
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 7.2
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) 28 9.5
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 9.5
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 149 bits (362), Expect = 2e-36
Identities = 68/77 (88%), Positives = 74/77 (96%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
EVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSS
Sbjct: 219 EVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSS 278
Query: 183 TQASIEIDSLFEGIDFY 233
T+ASIE+DSLFEGIDFY
Sbjct: 279 TEASIEVDSLFEGIDFY 295
Score = 105 bits (252), Expect = 4e-23
Identities = 47/87 (54%), Positives = 64/87 (73%)
Frame = +2
Query: 257 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 436
E+L +DLF S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKS
Sbjct: 304 EDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKS 363
Query: 437 INPDEXXXXXXXXXXXILHGDKSERCR 517
INPDE IL GDKS+ +
Sbjct: 364 INPDEAVAYGAAVQAAILSGDKSDEVK 390
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/68 (64%), Positives = 49/68 (72%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
GIETAG VMT LI+RN YSDNQP V I+VFEGER +TK NNLLGKF+L
Sbjct: 403 GIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDL 462
Query: 733 TGIPPAPR 756
+GIPPAPR
Sbjct: 463 SGIPPAPR 470
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 149 bits (360), Expect = 3e-36
Identities = 68/77 (88%), Positives = 75/77 (97%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
EVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSS
Sbjct: 218 EVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSS 277
Query: 183 TQASIEIDSLFEGIDFY 233
TQASIEIDSLFEGIDFY
Sbjct: 278 TQASIEIDSLFEGIDFY 294
Score = 112 bits (269), Expect = 3e-25
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 EELNADLFRSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN 430
EELN DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELN
Sbjct: 303 EELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELN 362
Query: 431 KSINPDEXXXXXXXXXXXILHGDKSE 508
KSINPDE ILHGDK +
Sbjct: 363 KSINPDEAVAYGAAVQAAILHGDKDD 388
Score = 103 bits (246), Expect = 2e-22
Identities = 50/68 (73%), Positives = 52/68 (76%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
GIETAGGVM+ LIKRN YSDNQPGVLIQVFEGER+MT NNLLGKFEL
Sbjct: 404 GIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFEL 463
Query: 733 TGIPPAPR 756
TGIPPAPR
Sbjct: 464 TGIPPAPR 471
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 140 bits (339), Expect = 1e-33
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
EVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSS
Sbjct: 311 EVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSS 370
Query: 183 TQASIEIDSLFEGIDFY 233
TQASIEIDSL++GIDFY
Sbjct: 371 TQASIEIDSLYDGIDFY 387
Score = 115 bits (276), Expect = 5e-26
Identities = 54/85 (63%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 EELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 433
EE+NA LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNK
Sbjct: 396 EEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNK 455
Query: 434 SINPDEXXXXXXXXXXXILHGDKSE 508
SINPDE ILHGDKSE
Sbjct: 456 SINPDEAVAYGAAVQAAILHGDKSE 480
Score = 97.5 bits (232), Expect = 1e-20
Identities = 46/68 (67%), Positives = 51/68 (75%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
G+ETAGGVMT IKRN YSDNQ VLIQV+EGER++TKDNNLLGKFEL
Sbjct: 496 GLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFEL 555
Query: 733 TGIPPAPR 756
+GIPPAPR
Sbjct: 556 SGIPPAPR 563
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 99 bits (238), Expect = 2e-21
Identities = 46/82 (56%), Positives = 62/82 (75%)
Frame = +2
Query: 257 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 436
EELNA LF+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++
Sbjct: 1000 EELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRG 1059
Query: 437 INPDEXXXXXXXXXXXILHGDK 502
INPDE +L G++
Sbjct: 1060 INPDEAVAYGAAVQAGVLGGEE 1081
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
EV +T GDTHLGGEDFD ++ HF++ +K+K K++ + RA+++LR E+AKR LS+
Sbjct: 915 EVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQ 974
Query: 183 TQASIEIDSLFEGIDF 230
QA +EI+S FEG DF
Sbjct: 975 HQARVEIESFFEGEDF 990
Score = 83.4 bits (197), Expect = 2e-16
Identities = 42/68 (61%), Positives = 45/68 (66%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
GIET GGVMT LI RN +DNQ V IQVFEGER MTKDN+ LGKF+L
Sbjct: 1097 GIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLGKFDL 1156
Query: 733 TGIPPAPR 756
GIPPAPR
Sbjct: 1157 NGIPPAPR 1164
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +2
Query: 233 HVNYSCS---LEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 403
H+N S E L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +Q
Sbjct: 48 HLNMKLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQ 107
Query: 404 DFFNGKELNKSINPDEXXXXXXXXXXXILHGD 499
D F G+ +K++NPDE +L GD
Sbjct: 108 DIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD 138
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
GIET GGV T LI RN +D Q V I+VF+GER M DN LLG+F+L
Sbjct: 153 GIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +2
Query: 233 HVNYSCS---LEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 403
H+N S E L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +Q
Sbjct: 103 HLNMKLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQ 162
Query: 404 DFFNGKELNKSINPDEXXXXXXXXXXXILHGD 499
D F G+ +K++NPDE +L GD
Sbjct: 163 DIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD 193
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
EVK+T GDT+LGGEDFDN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS
Sbjct: 25 EVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSS 84
Query: 183 TQASIEI 203
Q I +
Sbjct: 85 VQTDINL 91
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +1
Query: 553 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 732
GIET GGV T LI RN +D Q V I+VF+GER M DN LLG+F+L
Sbjct: 208 GIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 267
Query: 733 TGIPPAPR 756
GIPPAPR
Sbjct: 268 VGIPPAPR 275
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 73.7 bits (173), Expect = 1e-13
Identities = 27/64 (42%), Positives = 50/64 (78%)
Frame = +2
Query: 257 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 436
E +N DLF+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +
Sbjct: 336 ETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVA 395
Query: 437 INPD 448
I+P+
Sbjct: 396 IDPE 399
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 AGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 197
AG+ LGG+DF+ R + + +Q +++ + L T ++RLR E AK L+ + + +I
Sbjct: 252 AGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTI 310
Query: 198 E--IDSLFEG 221
+ + SL EG
Sbjct: 311 KLMLPSLSEG 320
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 182
+V STA + +LGG DFD +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++
Sbjct: 278 KVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSAN 337
Query: 183 T-QASIEIDSLFEGIDFY 233
T + I I+ E D +
Sbjct: 338 TSEIPINIECFMEDKDVH 355
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKR 167
+V +T D LGG +FD +++ +FKR K+K D TNKR+ +L+T+ E+ K
Sbjct: 179 KVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKN 238
Query: 168 TLSSSTQASIEIDSLFEGIDF 230
LS+ A+ +DSL EGIDF
Sbjct: 239 ILSTLESANCSVDSLCEGIDF 259
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = +2
Query: 254 LEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 433
LEE+ DLF PV ++L+ A M I +VLVGG R+PKVQ L EL K
Sbjct: 286 LEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAK 345
Query: 434 SINPDE 451
+IN DE
Sbjct: 346 NINADE 351
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +3
Query: 6 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSS 179
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 180 STQASIEIDSLFEGIDF 230
+ + +I+ +F+G DF
Sbjct: 261 NNEIFAQIEGVFDGKDF 277
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +2
Query: 326 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 502
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 338 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 451
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 71 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 163
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 62 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 151
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 71 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 163
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 13 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 129
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 71 LCPGVQEEIQKGPRYQQESS*AFAYCM 151
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/92 (22%), Positives = 36/92 (39%)
Frame = -3
Query: 639 GGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLSDLSPCKIXXXXXXXX 460
GG + G + L CG+D SS L GC Q + H +D C +
Sbjct: 248 GGAVKDVKWSPGGMQLLSCGYDKSSRLIDIHTGC---QVSLFHQNDYVTC-VQYHPIDRN 303
Query: 459 XXASSGLIDLLSSFPLKKSCRSFCTLGIRVEP 364
+ G + + S+ ++ +F ++V P
Sbjct: 304 VFLTGGARNGIKSWDIRTGNEAFTCTSLKVHP 335
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 71 LCPGVQEEIQKGPRYQQESS*AFAYCM 151
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 752 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 666
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022)
Length = 284
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 735 GQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS 562
GQL T VI+G T + DEY ++ + C G+ S D+ HDT S
Sbjct: 224 GQLSTTINPVIYGVMNKTFR--DEYKRMLCSLSCWCGCGRRGEASFESDDSQHDTRLS 279
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 602 LPSPLNRLRHSPPTLITNP 658
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,529,093
Number of Sequences: 59808
Number of extensions: 547335
Number of successful extensions: 4074
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4067
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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