Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0329.Seq
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6, ...    30   5.1  
AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.                 30   5.1  
AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.                 30   5.1  

>BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6,
           member B (zinc finger protein) protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 204 CPRAHRRGSRPKLNLK*HSRGRTGNTPGQV*ECGSRVV-AAHQASRELV 347
           C     R +RP  NLK HSR  +G  P +   CGSR V  AH  +  L+
Sbjct: 359 CSICGARFNRPA-NLKTHSRIHSGEKPYKCETCGSRFVQVAHLRAHVLI 406


>AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 204 CPRAHRRGSRPKLNLK*HSRGRTGNTPGQV*ECGSRVV-AAHQASRELV 347
           C     R +RP  NLK HSR  +G  P +   CGSR V  AH  +  L+
Sbjct: 359 CSICGARFNRPA-NLKTHSRIHSGEKPYKCETCGSRFVQVAHLRAHVLI 406


>AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 204 CPRAHRRGSRPKLNLK*HSRGRTGNTPGQV*ECGSRVV-AAHQASRELV 347
           C     R +RP  NLK HSR  +G  P +   CGSR V  AH  +  L+
Sbjct: 359 CSICGARFNRPA-NLKTHSRIHSGEKPYKCETCGSRFVQVAHLRAHVLI 406


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,013,319
Number of Sequences: 237096
Number of extensions: 1379023
Number of successful extensions: 5273
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5273
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)