Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0325.Seq
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.78 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.78 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   3.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 107 LSLTGRNIIARPPLCPLISPSKPMKT 184
           +S T R   ARPP  P    SKP++T
Sbjct: 404 ISTTPRPEWARPPSTPSADGSKPVQT 429


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 522 IYEVGQAHFYSEKCPLQRSSPL 457
           +Y +   HF+S KC +Q  S L
Sbjct: 340 LYVLNMEHFFSVKCSIQSESLL 361


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 297 NGNATPRHFLWWANP 341
           N N  P H + W++P
Sbjct: 408 NNNELPEHVIMWSSP 422


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 162 EINGHKGGRAMMLRPVKLNPTGNPRPQQPHQRR 64
           EI   K    ++   V ++PT  P P  P + R
Sbjct: 76  EIPSPKRSSPILAEKVSVSPTTPPTPSPPPEER 108


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 213 RFAYPHRLCTVFMGFEGEINGHKGGRAMMLR 121
           RF+ PH++ T+ M  +  I   +    +M++
Sbjct: 124 RFSQPHQILTLLMDIDSLITKWRYNHVLMVQ 154


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 213 RFAYPHRLCTVFMGFEGEINGHKGGRAMMLR 121
           RF+ PH++ T+ M  +  I   +    +M++
Sbjct: 284 RFSQPHQILTLLMDIDSLITKWRYNHVLMVQ 314


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 213 RFAYPHRLCTVFMGFEGEINGHKGGRAMMLR 121
           RF+ PH++ T+ M  +  I   +    +M++
Sbjct: 284 RFSQPHQILTLLMDIDSLITKWRYNHVLMVQ 314


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -2

Query: 168 EGEINGHKGGRAMMLRPVKLNPTGNPRPQQPHQRRFNDFI 49
           E + N H   +   L   K NP    + Q  HQ   +DF+
Sbjct: 100 ETKFNPHHEIKLQHLHQSKFNPHEEVKLQHLHQFPHHDFL 139


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -3

Query: 380 REDALMPFPPFHCRVGPPQEMTRRGVPVIDAAGDFQRR 267
           +E+ L+ +P    ++  PQ++T      +   GD  +R
Sbjct: 323 KEEGLLSYPEVCVKLANPQKLTTAAGKHLRKVGDPSKR 360


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = -2

Query: 432 GKRRRPVCRDQTPPLHPAGRRSDALPPLSLPGWPTTRNDAAWRSRYRRGWRFPAPPG 262
           G+R   + R++    +   RR   L     P W +  N  A R + R+  + PA  G
Sbjct: 514 GRRWHALGREEQAKYYELARRERQLHMQLYPDWSSRAN--ATRGKKRKRKQDPADGG 568


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = -2

Query: 432 GKRRRPVCRDQTPPLHPAGRRSDALPPLSLPGWPTTRNDAAWRSRYRRGWRFPAPPG 262
           G+R   + R++    +   RR   L     P W +  N  A R + R+  + PA  G
Sbjct: 406 GRRWHALGREEQAKYYELARRERQLHMQLYPDWSSRAN--ATRGKKRKRKQDPADGG 460


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -2

Query: 408 RDQTPPLHPAGRRSDALPPLSLP 340
           R   PP H  G  S   PP  +P
Sbjct: 57  RQGIPPHHYGGPPSGGQPPQGMP 79


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -1

Query: 376 KTL*CPSPPFTAGLAHH 326
           K L CP  PF     HH
Sbjct: 229 KRLTCPKCPFITEYKHH 245


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 125 CGQLNSIPPEI 93
           CGQLN I P +
Sbjct: 343 CGQLNPINPNV 353


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 FMPVDFTLEAHEDGAQTVWV 204
           F PVDFTL     G+ T ++
Sbjct: 360 FFPVDFTLLGFIFGSVTSYI 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,640
Number of Sequences: 336
Number of extensions: 4029
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)