Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0325.Seq
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical... 28 5.3
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical... 27 9.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 9.3
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 270 ALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDV 389
AL I G +T HFL+W P G ++ PDV
Sbjct: 243 ALMIRGLTLEGASTGLHFLFWGKPNEYGHYDFAGLYDPDV 282
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 270 ALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDV 389
AL I G +T HFL+W P G ++ PDV
Sbjct: 243 ALMIRGLTLEGASTGLHFLFWGKPNEYGHYDFAGLYDPDV 282
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 423 RRPVCRDQTPPLHPAGRRSDALPPLSLPGWP 331
R P Q PP +PAG +PP PG+P
Sbjct: 96 RPPGAEYQMPPGYPAGYPPYGMPPRHHPGYP 126
>Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical
protein F53B6.7 protein.
Length = 316
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 368 LMPFPPFHCRVGPPQEMTRRGVPVIDAAGDFQRRPVRARVKPV-ITCKPCIGSV 210
L+P PP H + PP +T RG V + G R + A ++P + C P + SV
Sbjct: 94 LVPRPPLHYKFDPP--LTERGQIVSETYG---RGLLNAGIRPFEVFCSPDMKSV 142
>AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical
protein Y45F10B.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 FMPVDF-TLEAHEDGAQTVWVGETEPMHGLQVMTGFTLALTGRRWKSPAASITGTPRRVI 321
+M D+ T+ GA T W +P H L+++ ++ T W P+ T RVI
Sbjct: 81 YMISDYLTIRIPFTGAITSWCAIQQPNHFLKILFFLSIYFTFTSWLFPSLLST---LRVI 137
Query: 322 SCGGPTRQ 345
S P RQ
Sbjct: 138 SIYFPQRQ 145
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 441 TGTYYKVDYSAGVDISRYKNVPVQPHIWPKNRSTILSAR 557
T TY KV + + +Y V Q H+W K R L AR
Sbjct: 951 TRTYTKVKKNYSIQTKQYHEVLQQSHLW-KRRMQDLEAR 988
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 441 TGTYYKVDYSAGVDISRYKNVPVQPHIWPKNRSTILSAR 557
T TY KV + + +Y V Q H+W K R L AR
Sbjct: 951 TRTYTKVKKNYSIQTKQYHEVLQQSHLW-KRRMQDLEAR 988
>AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical
protein Y45F10B.5 protein.
Length = 326
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 145 FMPVDF-TLEAHEDGAQTVWVGETEPMHGLQVMTGFTLALTGRRWKSP 285
FM D+ T+ G T W +P H L+V+ +T T W+ P
Sbjct: 81 FMLSDYITIRLPFTGILTSWCASQQPNHLLKVLFFYTFYFTYVSWQFP 128
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 262 SGRG*NLSSPVNHASAPFRLPTPSVHRLHGLRG 164
+G G +LSSP +HASAP +PT S L G
Sbjct: 1998 AGIGLDLSSPYDHASAP--VPTESYQIAFTLSG 2028
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 393 PLHPAGRRSDALPPLSLPGWPTTRNDAAWRSRYRRGWRFP 274
PLH AG + GW TR + S++ WR+P
Sbjct: 183 PLHAAGYTALIGTTDESYGWDITRRECHHDSKHTMTWRYP 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,172
Number of Sequences: 27780
Number of extensions: 383475
Number of successful extensions: 937
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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